| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4167 |
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| Symbol | |
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| ID | 5211151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5218431 |
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| End bp | 5220377 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597756 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001278461 |
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| Protein GI | 148658256 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGC GACTTCAAAA CCGGCATTTT CTCCTTTTCG ATATCCTGCT CGTGCCGCTT
GCGATCTACC TGAGTTTCGT CCTGCGGCTG GAAATGTTCA ATCTCGGCAG TTACTGGCTG
GTATGCATGC AGTTCTGCCT GACGGCGGTC GTGACCACCC CCCTGGTGTT TCGCGCGCTG
GGGATCTACC GTCGCTACTG GCGCTACGCT TCGTTTGAAG AACTGCTGCT GCTCTGTAGT
GCAACGTCGA TTGCGCTGGC GCTTGCCACG CTTGTGTTTA CTCTGATCGA TGCGCTCTTG
CCGGTGGTCG CAACGATGCC GCGCTCCATT CCTTTTATCG TTCCGCCCAT CGCAGCCACG
CTTATCAGTG TGCCACGGTT GCTGGTGCGC ATCGGTGCAG CGCGCGAGCG TCGGCGTCGT
GCAACTGACC GACCGGCGCC GGTGTTGATC ATGGGCGCTG GCGATGCTGC GTCGATTATT
GTGCGTGAGA TTCAACGCAA TCCAAAACTC GGCATGGAGG TTGTCGGGCT GCTGGACGAC
GATCCGGCGA AGCGTGGGCT GCGGTTGCAC GGCGTCGAAG TGATGGGTGA CCGCCACGCT
ATTCCGACAC TGGTAGCCCG CCACAAGGTG CGTCAGGTAA TCATTGCGAT GCCAGGCGCG
CCTGGTAAGG CAGTACGCGA GATTATGCAT ATTTGCGAGT CTGTTGGTGT GACAGTGCGC
ATCATGCCCG GGGTTCACGA ACTGATCGAC GGAACGATCA GCGTCAGCAA ACTGCGCAAC
ATCCAGATTG AGGACCTGCT GCGCCGTGCG CCGGTGCAAA CCGATACCGC GGCAGTGCGC
GCGCTGATCG CCAACCGACG GGTCCTGGTA ACCGGCGGCG GCGGTTCCAT CGGCAGCGAA
CTGTGCCGCC AGTTGATCCG CTGCGGTCCA TCGCACCTGA TTGTGCTTGG TCACGGCGAA
AACAGTGTGT TCGAGATCTG CAACGAACTT CAGCGTCTGG CAGAAGCGCA CGCCGGTCAA
TCGCCGCACA TTGTGCCGGT GATCGCCGAT ATTCGTGATC TGGAACGCCT GCGCGCGGTG
TTCGAAATGC ATGCGCCGGA ACTCGTTTTT CACGCAGCCG CACACAAACA TGTTCCACTG
ATGGAGGAAC ATCCGGTCGA AGCCATCAGC AACAATGTCA TCGGCACGCG CAACCTGCTC
GACGTATCGC TCGAAACCGG CGTCGAACGG TTTGTGATGA TCTCATCGGA TAAGGCGGTC
AATCCGACGA GCGTGATGGG CGCAACCAAG CGCATTGCCG AGATGCTGGT GCTCAACGCT
GCGCGGATCA GCGGACGACC CTACGTGGCG GTGCGTTTTG GGAATGTGCT GGGCAGTCGT
GGCAGTGTCG TGCTGACCTT CAAACGGCAG ATTGCCGCCG GTGGACCGGT AACGGTCACG
CATCCGGAGA TGCGTCGCTA CTTCATGACC ATTCCAGAAG CGGTGCAACT GGTGCTCCAG
GCGTCGGTAC TGGGGCGCGC CGGCGAGATT TTTATGCTGG ACATGGGGGA ACCGGTGAAG
GTGGTCGATC TGGCGCGCGA CATGATCCGT CTGTCGGGAT TGGAGGTCGG GCGTGATATT
GATATCTGCT TCACCGGCAT ACGTCCGGGT GAGAAATTAT TTGAAGAATT GTTCGCCCAC
GGTGAAGAAT ATCAGCCAAC AGCGCACAGC AAAATCTTCA TCGCCGCTGG CGCCAGCAAC
AATATTCCGC CCGACTTGCG CACGGATGTA GCGCTGCTCG AACAGGTTGC GCGCGCGAAC
GACGATGCCG CCGCACGACG CATGCTGCGC CACATCGTCC CGGAGTACTG CCCGCCGTTG
CCTGCCCCGC CGATACCTGT CGCTGAAAAT ACGCCCTATC CTGTGCTGGT GCGTCCATTG
CAACCGCTGA TCGGGGGTGG ACGATGA
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| Protein sequence | MMQRLQNRHF LLFDILLVPL AIYLSFVLRL EMFNLGSYWL VCMQFCLTAV VTTPLVFRAL
GIYRRYWRYA SFEELLLLCS ATSIALALAT LVFTLIDALL PVVATMPRSI PFIVPPIAAT
LISVPRLLVR IGAARERRRR ATDRPAPVLI MGAGDAASII VREIQRNPKL GMEVVGLLDD
DPAKRGLRLH GVEVMGDRHA IPTLVARHKV RQVIIAMPGA PGKAVREIMH ICESVGVTVR
IMPGVHELID GTISVSKLRN IQIEDLLRRA PVQTDTAAVR ALIANRRVLV TGGGGSIGSE
LCRQLIRCGP SHLIVLGHGE NSVFEICNEL QRLAEAHAGQ SPHIVPVIAD IRDLERLRAV
FEMHAPELVF HAAAHKHVPL MEEHPVEAIS NNVIGTRNLL DVSLETGVER FVMISSDKAV
NPTSVMGATK RIAEMLVLNA ARISGRPYVA VRFGNVLGSR GSVVLTFKRQ IAAGGPVTVT
HPEMRRYFMT IPEAVQLVLQ ASVLGRAGEI FMLDMGEPVK VVDLARDMIR LSGLEVGRDI
DICFTGIRPG EKLFEELFAH GEEYQPTAHS KIFIAAGASN NIPPDLRTDV ALLEQVARAN
DDAAARRMLR HIVPEYCPPL PAPPIPVAEN TPYPVLVRPL QPLIGGGR
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