Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4163 |
Symbol | |
ID | 5211147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5212422 |
End bp | 5213891 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597752 |
Product | hypothetical protein |
Protein accession | YP_001278457 |
Protein GI | 148658252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.567691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACC AACCACGCAC CCGAACGACC GGCATCATCC GTCGGATCGC CAGACTGATC GGAATTGTCA TCCTGGCGAT GGTCACAACT GCCAGTCTCT CGCCGTTGGC GGGATACGCC GAACAGGGCG ACACCAGCGC AGGTACAACG ATCTACCTTC CGCTGGTGGC CAAAGCGAGT TGCTCGGCGG ATCTCCCGCG CATCAACGCG CCTCGATTCA GCGGCGCCAT TCCTTTCGCG CAGACCGCTA TCGCCTGGTT TGGCAAAGTT TCACCAACAC AGAACTACAC CGACATCCGG GTAGGGTACA ACGCGAATGA ACTCTACGTG TACCTGGCAA TTTTCGATCG CCACCTCTGG TACGACGATA ATCCCACACC ACAGACTCTG ACTCAGTGGG ATGCAGTGAC GCTGCTGCTG GACACCTCTG GCGGCGCTGT ACTTTCACCT GCTTCCTGGA AGATCGTGGC GCAGTTGTAC GGCGATCCGA GTCCACAACG TCGCGCCGTC TATCGTGGCA GCGCAACAGG CTGGCAGGCG ACCAGCATCT CCTTCAACGC CGTCCCAGGC TGGCGCGGCA ATGCGCTGAA CGATAACAGC GACACCGACC GGGGATGGGC AATGGGGTTC ACCATTCCGT TCAGCAGTCT GGGGCTTTCA TCCGCCCCAC TTGATGGAAC GTCCTGGCGT ATGGCAGTGA TCGTTCATGA CCGCGACACG CGCGCCGGTC CGCCAATTGG GGATCAGTTC TGGCCCCCGC AGGGTTCGCT CGACTCTCCC GGTTGCTGGG GCGTGTTGAA CTTCGGGTTG CCCTCGTACC AGAGCAATGT AACGCCAACC GGATCGGTGA CCATCCGGCG TCCCACCGAG CGCAGTCCGC TCGTCCCGGA TGCCGATGTG GGCGGGGCGA TCACCAATCA GTGCCCGGGT GACGAGAACC ATATCTGGAA TGAGTGGGGT AATCGCAATT ATGGGCGCGC CCCCGATTTC AACATCCAGA ACCAGTCTGA CATAGCCGAC TGGCCCTGTT TTGCGAAGTA TTACGTCACC TTTCCCCTCG ACAGCATACC GCCCGGCAAG GTGATCGTTT CAGCCACGCT GACGCTCCAT CAGTTCGGGA ACTCTGGCGG GATGGATGTT GCGAAACCTT CGTGGATTCA GGTGCTGACG GCTGCGGGAG ACTGGAGCGA GGATACCATT ACCTGGAACA ACGCGCCAAT TGCCTATGAG AATGTTGGCG GAAGTTGGGT CAATCCCACC ACCCTGACCG GCTGGCCTGG CACTCCGCGT ACCTGGGATG TGTCGTATGC CGTGGCGCGG GCATATGCGC GGGGTGAGCC GTTGCGTCTC ATTCTCTACT CCGCCGACTC GGACTATCAC AGTGGAAAGT ATTTCGTCTC TTCCGACACC GGCGACTGGA ATATCGCAGG GCGACCGCGC CTTGACGTGC GGTGGGGCGA GGCGCGGTAG
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Protein sequence | MFNQPRTRTT GIIRRIARLI GIVILAMVTT ASLSPLAGYA EQGDTSAGTT IYLPLVAKAS CSADLPRINA PRFSGAIPFA QTAIAWFGKV SPTQNYTDIR VGYNANELYV YLAIFDRHLW YDDNPTPQTL TQWDAVTLLL DTSGGAVLSP ASWKIVAQLY GDPSPQRRAV YRGSATGWQA TSISFNAVPG WRGNALNDNS DTDRGWAMGF TIPFSSLGLS SAPLDGTSWR MAVIVHDRDT RAGPPIGDQF WPPQGSLDSP GCWGVLNFGL PSYQSNVTPT GSVTIRRPTE RSPLVPDADV GGAITNQCPG DENHIWNEWG NRNYGRAPDF NIQNQSDIAD WPCFAKYYVT FPLDSIPPGK VIVSATLTLH QFGNSGGMDV AKPSWIQVLT AAGDWSEDTI TWNNAPIAYE NVGGSWVNPT TLTGWPGTPR TWDVSYAVAR AYARGEPLRL ILYSADSDYH SGKYFVSSDT GDWNIAGRPR LDVRWGEAR
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