Gene RoseRS_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4163 
Symbol 
ID5211147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5212422 
End bp5213891 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content60% 
IMG OID640597752 
Producthypothetical protein 
Protein accessionYP_001278457 
Protein GI148658252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.567691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACC AACCACGCAC CCGAACGACC GGCATCATCC GTCGGATCGC CAGACTGATC 
GGAATTGTCA TCCTGGCGAT GGTCACAACT GCCAGTCTCT CGCCGTTGGC GGGATACGCC
GAACAGGGCG ACACCAGCGC AGGTACAACG ATCTACCTTC CGCTGGTGGC CAAAGCGAGT
TGCTCGGCGG ATCTCCCGCG CATCAACGCG CCTCGATTCA GCGGCGCCAT TCCTTTCGCG
CAGACCGCTA TCGCCTGGTT TGGCAAAGTT TCACCAACAC AGAACTACAC CGACATCCGG
GTAGGGTACA ACGCGAATGA ACTCTACGTG TACCTGGCAA TTTTCGATCG CCACCTCTGG
TACGACGATA ATCCCACACC ACAGACTCTG ACTCAGTGGG ATGCAGTGAC GCTGCTGCTG
GACACCTCTG GCGGCGCTGT ACTTTCACCT GCTTCCTGGA AGATCGTGGC GCAGTTGTAC
GGCGATCCGA GTCCACAACG TCGCGCCGTC TATCGTGGCA GCGCAACAGG CTGGCAGGCG
ACCAGCATCT CCTTCAACGC CGTCCCAGGC TGGCGCGGCA ATGCGCTGAA CGATAACAGC
GACACCGACC GGGGATGGGC AATGGGGTTC ACCATTCCGT TCAGCAGTCT GGGGCTTTCA
TCCGCCCCAC TTGATGGAAC GTCCTGGCGT ATGGCAGTGA TCGTTCATGA CCGCGACACG
CGCGCCGGTC CGCCAATTGG GGATCAGTTC TGGCCCCCGC AGGGTTCGCT CGACTCTCCC
GGTTGCTGGG GCGTGTTGAA CTTCGGGTTG CCCTCGTACC AGAGCAATGT AACGCCAACC
GGATCGGTGA CCATCCGGCG TCCCACCGAG CGCAGTCCGC TCGTCCCGGA TGCCGATGTG
GGCGGGGCGA TCACCAATCA GTGCCCGGGT GACGAGAACC ATATCTGGAA TGAGTGGGGT
AATCGCAATT ATGGGCGCGC CCCCGATTTC AACATCCAGA ACCAGTCTGA CATAGCCGAC
TGGCCCTGTT TTGCGAAGTA TTACGTCACC TTTCCCCTCG ACAGCATACC GCCCGGCAAG
GTGATCGTTT CAGCCACGCT GACGCTCCAT CAGTTCGGGA ACTCTGGCGG GATGGATGTT
GCGAAACCTT CGTGGATTCA GGTGCTGACG GCTGCGGGAG ACTGGAGCGA GGATACCATT
ACCTGGAACA ACGCGCCAAT TGCCTATGAG AATGTTGGCG GAAGTTGGGT CAATCCCACC
ACCCTGACCG GCTGGCCTGG CACTCCGCGT ACCTGGGATG TGTCGTATGC CGTGGCGCGG
GCATATGCGC GGGGTGAGCC GTTGCGTCTC ATTCTCTACT CCGCCGACTC GGACTATCAC
AGTGGAAAGT ATTTCGTCTC TTCCGACACC GGCGACTGGA ATATCGCAGG GCGACCGCGC
CTTGACGTGC GGTGGGGCGA GGCGCGGTAG
 
Protein sequence
MFNQPRTRTT GIIRRIARLI GIVILAMVTT ASLSPLAGYA EQGDTSAGTT IYLPLVAKAS 
CSADLPRINA PRFSGAIPFA QTAIAWFGKV SPTQNYTDIR VGYNANELYV YLAIFDRHLW
YDDNPTPQTL TQWDAVTLLL DTSGGAVLSP ASWKIVAQLY GDPSPQRRAV YRGSATGWQA
TSISFNAVPG WRGNALNDNS DTDRGWAMGF TIPFSSLGLS SAPLDGTSWR MAVIVHDRDT
RAGPPIGDQF WPPQGSLDSP GCWGVLNFGL PSYQSNVTPT GSVTIRRPTE RSPLVPDADV
GGAITNQCPG DENHIWNEWG NRNYGRAPDF NIQNQSDIAD WPCFAKYYVT FPLDSIPPGK
VIVSATLTLH QFGNSGGMDV AKPSWIQVLT AAGDWSEDTI TWNNAPIAYE NVGGSWVNPT
TLTGWPGTPR TWDVSYAVAR AYARGEPLRL ILYSADSDYH SGKYFVSSDT GDWNIAGRPR
LDVRWGEAR