| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4142 |
|---|
| Symbol | |
|---|
| ID | 5211126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5188392 |
|---|
| End bp | 5188970 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640597731 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278436 |
|---|
| Protein GI | 148658231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC GAAATGCGAT GCGCGCGAAG GCGCCAAAGG TTTCAACCGA ACCGGGTCTG
TATGGGTTGA TAGCTGAGTT CGACAGCGCG GATGCGTTGC TGGCGGCAGC TGAAAAAACC
CGTGATGCCG GGTATAAAAA GTTCGAAGCG TATACGCCGA TCCCGATCCA TGGACTGGAT
GAAGCGGTCG GCTACCGGGG CACGCGCCTG CCATGGGTTA TTTTTGGCGC GGGGCTGCTC
GGTGCGAGCG GGATGTTTGC TCTGCAAACG TGGATCAATG TGGTGGAGTA TCCGATGAAT
GTTGGTGGAC GACCGCTGTT CAGCTGGCCC GCTTTCATCC CGGCTACGTT CGAAGGGATG
GTGCTGCTGT CGGCGTTCGC CGCCGTGTTT GGGCTGATTG CGGCATGCGG TCTGCCGCGT
CCATACCATC CGGTCTTCAA CGCGCCCAAC TTCGAGCGAG CGTCAGTTGA CCGGTTTTTC
CTGTGTATCG AGGCTGCCGA CCCCAAGTTC GAACTCAAGC GGACGCGCCA GTTTCTGGAG
AGCCTGGAGC CGCTGGCGGT CTCTACCGTA GATAACTAG
|
|---|
| Protein sequence | MLKRNAMRAK APKVSTEPGL YGLIAEFDSA DALLAAAEKT RDAGYKKFEA YTPIPIHGLD
EAVGYRGTRL PWVIFGAGLL GASGMFALQT WINVVEYPMN VGGRPLFSWP AFIPATFEGM
VLLSAFAAVF GLIAACGLPR PYHPVFNAPN FERASVDRFF LCIEAADPKF ELKRTRQFLE
SLEPLAVSTV DN
|
|---|
| |