| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4141 |
|---|
| Symbol | |
|---|
| ID | 5211125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5186956 |
|---|
| End bp | 5188386 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640597730 |
|---|
| Product | polysulphide reductase, NrfD |
|---|
| Protein accession | YP_001278435 |
|---|
| Protein GI | 148658230 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5557] Polysulphide reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAC AACCCGCACA GAAATCGGCG TATGGCAAGA TGCTTGAGGA GTTGCTGGGA
CCGAAGCAGA GTTATGAATC GGTCACCAGA ACCATTGGCG ACATTGTGCT GACGCCGCTC
AAGCGAACCC CGTGGGGTTG GGCGTTGGGG TTCGTCCTTG CAGCCCTGGG ATTGCTGATG
TACCTCTACT CGCTGGCGGT GCTGTTTACC GTCGGCGTTG GCATCTGGGG GATTAATATC
CCGGTTGCCT GGGGCTTCGA TATTATCAAC TTCGTCTGGT GGATCGGCAT CGGGCACGCC
GGGACGCTCA TCTCGGCGAT TCTGCTCCTC TTCCGGCAGG ACTGGCGCAC CTCGATCAAC
CGTGCTGCCG AGGCGATGAC GATCTTCGCC GTTGCGTGCG CCGGTATCTA CCCGCTGGTG
CATACGGGCC GCCCCTGGCT CGATTACTGG ATGCTCCCCT ATCCTGGCAC GCTCGGTATG
TGGCCGCAGT TCCGCAGCGC TCTGGAATGG GACGTGTTTG CGATCTCGAC GTATGCCACG
GTCTCAATCC TGTTCTGGTA TGTCGGTCTC ATTCCCGACC TTGCTTCGCT GCGCGATCGG
GCGACGAATA AGTGGGTCAA GATCTTCTAT GGCTTCCTGG CGCTCGGCTG GCGCGGCGGC
GCCCGCGACT GGCATCGCTA TGAGATGGCG TCGCTCATTC TGGCAGGGCT TTCGACACCG
CTGGTGCTGT CGGTGCACAG TATCATCAGC CTGGACTTCG CCATCTCACA GTTGCCCGGC
TGGCACGTGA CGGTCTTCCC GCCCTACTTC GTTGCCGGTG CAGTCTACTG CGGCTTCGCA
ATGGTGATCC TGCTGCTGAT ACCAATGCGC CGTTGGTACA AACTGCACGA TCTGATCACG
ATGAAGCACT TCGACCTGAT GGGCAAGGTG ATGCTGGCGT CAGGTCTGGT GGTGGCGTAT
GGCTATTTCG GTGAAATGTT CTATGCCTGG TACAGCGCCA ATATCTACGA GTACTTCCTG
ATCACGAACC GCACGATGGG TCCGTACGCC TGGAGTTACT GGGCGCTGAT CGTGCTGAAT
GTCGCCATTC CGCAACTGTT GTGGTTCAAG CGCTTCCGCG TCAGCCTGCC CTGGCTCTTC
TTCATCTCGA TCTGTATCAA TATCGGGATG TGGTTCGAGC GCTGGGTGAT CATCGTGCTT
AGCCTGCACC GCGACTTTAT GCCAGCGTCG TGGGGCTACT ACACGCCGAG TGTGTGGGAT
ATCTCACTGT ACGCCGGTTC GTTCGGATGG TTCTTCTTCC TGTTCTTCCT GTTCATCCGC
TTGTTGCCGG CGATCTCGAT CTTCGAGGTG CGCGACCTGG TGCATAAGAT CGAGGCAGAA
CAGCACGCGC CGGTCCAGGT CGGCGGCGCC GGACACGTCA GGGAGGCGTA G
|
|---|
| Protein sequence | MASQPAQKSA YGKMLEELLG PKQSYESVTR TIGDIVLTPL KRTPWGWALG FVLAALGLLM
YLYSLAVLFT VGVGIWGINI PVAWGFDIIN FVWWIGIGHA GTLISAILLL FRQDWRTSIN
RAAEAMTIFA VACAGIYPLV HTGRPWLDYW MLPYPGTLGM WPQFRSALEW DVFAISTYAT
VSILFWYVGL IPDLASLRDR ATNKWVKIFY GFLALGWRGG ARDWHRYEMA SLILAGLSTP
LVLSVHSIIS LDFAISQLPG WHVTVFPPYF VAGAVYCGFA MVILLLIPMR RWYKLHDLIT
MKHFDLMGKV MLASGLVVAY GYFGEMFYAW YSANIYEYFL ITNRTMGPYA WSYWALIVLN
VAIPQLLWFK RFRVSLPWLF FISICINIGM WFERWVIIVL SLHRDFMPAS WGYYTPSVWD
ISLYAGSFGW FFFLFFLFIR LLPAISIFEV RDLVHKIEAE QHAPVQVGGA GHVREA
|
|---|
| |