| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4125 |
|---|
| Symbol | |
|---|
| ID | 5211109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5168722 |
|---|
| End bp | 5169264 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640597714 |
|---|
| Product | zinc finger SWIM domain-containing protein |
|---|
| Protein accession | YP_001278419 |
|---|
| Protein GI | 148658214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCGG ACCTGATCGG GAAGATCGAA AAAGCCCGGC GTTACGCGCA GGAACCGGAG
CGCATCGCAC TTGACGAATT GACCGTTCGT TTCCACGGCG GCAACAACGA TCACATCGTT
CAACTTGCGA ATGGACGTTG GGCTTGCGAC TGTGATGTGT TTCGTTTGCG CGGTGTGTGC
GCTCACGTTA TGACCCTGCA AAAGGCGCTG GCGCCGATGC TGTCGGCTGA AGCGCGCGAG
CCGGGTCCTG TGATTATCCA TTCTGAATTG ATCAGCATGA TCGAGAAGTC GCGCCGCTAC
CTGCATGAAC TGAATCGTAT CGAGATTCTG TCACTGCGCG CGCGCTTCCG TGGTAATAAC
AACGACCACG TGCTGATGTT GACCGACGCC GGCTGGTCGT GCGATTGTTC AACGTTCCGT
GTGTGGAACA CCTGTGCGCA CGTCATGGCG CTTCAGCGTA TTCTTGCGCC AATGCTGCCT
GCCATCGCCC GTGAGCCGGG CACGGTTGTC GTCGAAGAAC ATCTGGTCAG CGCCTTAAGT
TGA
|
|---|
| Protein sequence | MHSDLIGKIE KARRYAQEPE RIALDELTVR FHGGNNDHIV QLANGRWACD CDVFRLRGVC
AHVMTLQKAL APMLSAEARE PGPVIIHSEL ISMIEKSRRY LHELNRIEIL SLRARFRGNN
NDHVLMLTDA GWSCDCSTFR VWNTCAHVMA LQRILAPMLP AIAREPGTVV VEEHLVSALS
|
|---|
| |