| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4122 |
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| Symbol | |
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| ID | 5211105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5163567 |
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| End bp | 5165891 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597710 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001278416 |
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| Protein GI | 148658211 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAC CAGCAACACT CGCGGTGAGC AGTGGCGATG TCGCCACCGA CTCCTCTGTT
CGTTCAACGC GCCGTACTAG TGCCGCGCCG CAGCCGCCGC TGCGTCCAAA TCCCGAGTTT
ACCCATAGCC CGGTCGCCGA TGAGCTGGTT GCGCGTCTGA AACTCTACCA GCGCCAGCCG
AACGGCAGTA CCGATCGGAT GGCACGCAGC GAGGAACTGG TGCGCAATGC GTATGCCGTC
GCCTGTGAAG CGCACGGCAA ACAGAAGCGC GACTCGGGTG AGCCGTATAT CGATCATCCG
GTTGCCGTTG CGCATATTCT GATCGACCTG CAGCTCGATG CAGCGTCAGT TGCTGCCGCA
CTGCTCCACG ATGTCCTGGA AGATACCCTC GTCTCCAAAG AACAACTGAC AGCGTTGTTC
GGCGCCGAGA TCGCCAATCT CGTCGATAGC GTCACCAAAC TTTCGGCGCT GGAAGCGCGC
ACCCGCGAAG AAGCGCAGGT CGGCACGTAT CGCAAAATGT TCATTGCAAT GGCGGACGAT
CCGCGTGTGG TGCTGGTCAA ACTGGCAGAC CGCCTGCACA ACATGCGCAC TATCGGCTCG
CTCTCCGAAG AGCGCCAGAA ACGCATGGCG CTCGAGACGC TCGAAATCTA CGCCCCGCTG
GCGCATCGCC TCGGCATCTG GCAGATCAAG TGGGAACTCG AAGACCGCGC CTTTGCCGTC
CTCAACCCTG AAAAATATCA GGAGATCAGT CGTCAGCTGT CATTGCGGCG CGATGCGCGC
GAGCGCCTCG TCCACCGCGT GATCCAGCGT CTGCGCCAGG TGCTCGAAAA AGAAGGGATC
AAAGCGGATA TTACGGGGCG ACCCAAGCAC ATCTATTCGA TCTATCGCAA GATGGAACGC
AAGGGCGTCA GCCTCGACCA GATCTACGAC CAGCTCGCGG TGCGCGTGAT TGTCGATACG
GTTGCCGACT GTTACCGCGT GCTCGGTCTG GTGCATGCAA CCTGGCCCCC CGTGCCCGGC
GAGTTCGACG ATTATATCGC CATGCCGAAG GAAAGCATGT ACCAGTCACT GCACACAACC
GTGCTGATAC CTGGTGGTCA ACCCTGCGAG ATCCAGATCC GCACCCACGA GATGCACGAA
GTCGCTGAAC GCGGTATTGC GGCGCACTGG CGCTACAAAG AAGGGTTTGG ACGCATCGAC
GCATCGTTCG AGAGCAAACT GGCATGGTTG CGCGGCTTGA TCGAATGGCG GCGCGATCTC
ACCGATGCCC GCGAGTTCGT CGATTCGTTC AAGACCGATG TGCTCGAAGA GCAGGTGTAT
GTGTTCACTC CCAAGGGCAA AATCATCGAC CTGCCGGTTG GAGCGACGCC GGTTGACTTC
GCCTACCGCA TTCACTCCGA TGTCGGGCAC AGTTGCGTCG GCGCAAAGGT GAACAACCGG
ATTGTTCCGC TCGATTACCA GTTGCGCAAC GGCGAAATCG TCCATATTAT GACCTCGAAG
ACGCCGCGCG GTCCGAGCCG CGACTGGCTC AACTTCGTCA AGACGAGCGG CGCGCGCAAC
CATATTCGCC GCTACTTCAA GCGTCTCGAC CGTACCGAAA ATATCGCTGC CGGGCGCGAA
TTGCTGGAAA AAGAACTCAA ACGCCTCGGT CTGTCGGTGC CCTTCGAGGA GATTGTCGCC
ATCACCGGTC TCAAGTCGAT CGATGATGTG TTCGCCCAAA TCGGCAGCGG CGATATCACA
GCGCGTCAGG TTGCGCAAAA GATTCTCAGC CACCGCACAC CGGTCGGTGC AGACGACCTG
GCAGACATCC CGCAGGTCGC TCCGACAACT GAACGCCCCA ACGATACCAG CATCATCCGT
GTACGCGGCA TCGAAAACAC GCAGGTGCCG ACCCGCCTGG CGCGCTGTTG CAATCCGGTG
GCGGGCGAAC CGATTGTCGG CTTTGTGACT CGTGGCAAGG GAATTACGGT GCATCGCGCC
GACTGCCGCA CCATCCTGAA CGAACGCGAC CGCGCGCGCC TGGTGGAGGT GACCTGGGGC
GCCGGCGTAC CAAAGCAGGG ATACCCGGTG CCGGTACGGA TCGAAGCCTG GGATCGCGTT
GGGCTGTGGC GTGATGTCTC AGGCGTTATC GCCGATGCGG GCATTAACAT CGACGCGGTC
GAGCAGGTGC CAACCCGCCG CCCCGGTCGC GCGGTGCTGA CCGTCACCCT CCGCATCCAG
AGCATTGCGC AGCTGACCGC CATCCTCGAC AAACTCAACC GTCTCTCCGA TGTGATCGAA
GCGCGTCGTG AGCAAAATGC CGCCCCGACT GCTGAAACGC CCTGA
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| Protein sequence | MDSPATLAVS SGDVATDSSV RSTRRTSAAP QPPLRPNPEF THSPVADELV ARLKLYQRQP
NGSTDRMARS EELVRNAYAV ACEAHGKQKR DSGEPYIDHP VAVAHILIDL QLDAASVAAA
LLHDVLEDTL VSKEQLTALF GAEIANLVDS VTKLSALEAR TREEAQVGTY RKMFIAMADD
PRVVLVKLAD RLHNMRTIGS LSEERQKRMA LETLEIYAPL AHRLGIWQIK WELEDRAFAV
LNPEKYQEIS RQLSLRRDAR ERLVHRVIQR LRQVLEKEGI KADITGRPKH IYSIYRKMER
KGVSLDQIYD QLAVRVIVDT VADCYRVLGL VHATWPPVPG EFDDYIAMPK ESMYQSLHTT
VLIPGGQPCE IQIRTHEMHE VAERGIAAHW RYKEGFGRID ASFESKLAWL RGLIEWRRDL
TDAREFVDSF KTDVLEEQVY VFTPKGKIID LPVGATPVDF AYRIHSDVGH SCVGAKVNNR
IVPLDYQLRN GEIVHIMTSK TPRGPSRDWL NFVKTSGARN HIRRYFKRLD RTENIAAGRE
LLEKELKRLG LSVPFEEIVA ITGLKSIDDV FAQIGSGDIT ARQVAQKILS HRTPVGADDL
ADIPQVAPTT ERPNDTSIIR VRGIENTQVP TRLARCCNPV AGEPIVGFVT RGKGITVHRA
DCRTILNERD RARLVEVTWG AGVPKQGYPV PVRIEAWDRV GLWRDVSGVI ADAGINIDAV
EQVPTRRPGR AVLTVTLRIQ SIAQLTAILD KLNRLSDVIE ARREQNAAPT AETP
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