Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4120 |
Symbol | |
ID | 5211103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5160917 |
End bp | 5162041 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597708 |
Product | hypothetical protein |
Protein accession | YP_001278414 |
Protein GI | 148658209 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.897659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCG GGATCCTTCT GGTCACCCTT CTGCTGGCAA TTACCGGTGC GCTTGTTGCA GCAGCGCCAG CAAGTGCGGC GGAACGGCAG CGATGTTTCC CGGAAACCGG CTACTGCGTC TCCGGCGCGA TCCTGCGCTA CTGGGAGCGC AACGGCGGTC TGCCCGTATT CGGCTACCCG ATCAGCGAAC TGCGGATCGA GCAGGTCGAG AACTGGAGCG GACCGGTGCA GTGGTTCGAG CGTGACCGTC TCGAGGATCA CGGCTCGATC GGCGTCCTCG CCGGTCGGTT GGGCGCCCAG GCGCTCGAAT ACCAGGGACG TTACTGGCAA TCGTTGCCGC GCCCGACATC GATCCCGAAG GAATGCCGGT TCTTCCCGGA GACCGGACAC TCGCTCTGCG GCAAGTTCCT TGAGTACTGG CAGCGCAACG GCGGCTTGAT GCGCTTCGGT TATCCGATCA GCGAACCGAT GACCGAAACG CTGGCGAATG GTGATGAACT CTGGACCGGC ACGGTGCAGT ACTTCGAGCG ACGACGGATG GAGTACCATC CCGAACTGGC AGGAACGCGC TACGAGGTGC TGCTTGGGTT GCTGGGGCGC GATATATACA CCGCCGTTAG CGACCGCTGC GCTCCACCGG CGCCGTTCCT CGGTCCTACC ACCCGCGCAT ATCCGAACAT TCTTGGGTGT CCATCGCCAT TCCCGAAACT GGCGGTTCCG GCAGCATCGC AGCGCTTCGA GCGCGGCGCC ATGTACTGGG TTGCCAACAC GGGTGACATT GCGTCCTGGC AGGCTGGCAA TATCTGGGTG GTCTTCTACG ACAACGCGCG CGGCTCGCTT GTCTGGCAAC TCCACCCCGA TTACTGGCGT GAAGGGGAGC CGGTGAGCGG CGGGATGACG CCTCCGCCGG GTCTGTTCGA GCCGATCCGC GGGTTCGGCA AACTGTGGCG CGAGAACCAG TTCGTCCGCG AGACGCTCGG TTGGGCGGTT GAACCGGAAA GCGCCGACAA AGCTGTGGAG CAGTACTTCC GGGGCGGAGC GTTCGCCATC TATCGCATGA ATACTGACCG GATCTACATT ATGAAGCCGG ATAACACGGC AGAGGACATT CAGCGCATTC GCTGA
|
Protein sequence | MKRGILLVTL LLAITGALVA AAPASAAERQ RCFPETGYCV SGAILRYWER NGGLPVFGYP ISELRIEQVE NWSGPVQWFE RDRLEDHGSI GVLAGRLGAQ ALEYQGRYWQ SLPRPTSIPK ECRFFPETGH SLCGKFLEYW QRNGGLMRFG YPISEPMTET LANGDELWTG TVQYFERRRM EYHPELAGTR YEVLLGLLGR DIYTAVSDRC APPAPFLGPT TRAYPNILGC PSPFPKLAVP AASQRFERGA MYWVANTGDI ASWQAGNIWV VFYDNARGSL VWQLHPDYWR EGEPVSGGMT PPPGLFEPIR GFGKLWRENQ FVRETLGWAV EPESADKAVE QYFRGGAFAI YRMNTDRIYI MKPDNTAEDI QRIR
|
| |