Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4117 |
Symbol | |
ID | 5211100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5158424 |
End bp | 5159140 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597705 |
Product | phosphoribosyltransferase |
Protein accession | YP_001278411 |
Protein GI | 148658206 |
COG category | [R] General function prediction only |
COG ID | [COG1926] Predicted phosphoribosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCA GGGTTAAAGA GTTTCCTCCG CTGTTCCGCG ACCGACGCGA GGCAGGTATG TTGCTGGCGC GTCGGCTCGC GGCATTAGCC AACACTCCCG ATCTGCTGGT GCTGGCGCTG CCGCGTGGCG GCGTACCGAT TGCGTATGAG GTCGCGCGTG CGCTTCACGC GCCGCTCGAT ATTGTCCTCG TGCGTAAACT CGGCGTCCCC GGACATGCCG AACTGGCGAT GGGCGCCATC GCGGAAGGCG GTGTGCGCGT CCTGAACCAC GCAGTCATCA GAGAACTTGG CATACCGTCA GACATCATCG AGCATATCAC CACTGAAGAA CAACGTATTC TCGAACAACG CAGACGCCTC TACCGCGGCG ATCGGCGTCC GCCGACGGTT GAAGGCGCGC GTGTCATTCT CATCGACGAT GGTCTGGCGA CCGGGATGAC CATGCAGGCT GCGATCGAAG CGGTTCGGCG GGGTAGTCCG GCCGGGATCA TTGTGGCAAC GCCGGTTGCT GCTCCTGAGA GTGTCGCGGA AATCGAACCG CTGGTGGATG AGGTTGTTGC GCTGGCGACA CCTGAATTGC TCTACGCAAT TGGCATGTGG TACAGCGACT TCACGCCAAC CAGTGATGAG GAGGTGCGCG CGCTCCTCGC CGAGGCGTTT TGCGGCTATG CACCGGCGCC TCGTTCCGAT GAAGCGCTGG AACGAGGCGC CACCTGA
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Protein sequence | MRIRVKEFPP LFRDRREAGM LLARRLAALA NTPDLLVLAL PRGGVPIAYE VARALHAPLD IVLVRKLGVP GHAELAMGAI AEGGVRVLNH AVIRELGIPS DIIEHITTEE QRILEQRRRL YRGDRRPPTV EGARVILIDD GLATGMTMQA AIEAVRRGSP AGIIVATPVA APESVAEIEP LVDEVVALAT PELLYAIGMW YSDFTPTSDE EVRALLAEAF CGYAPAPRSD EALERGAT
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