| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4116 |
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| Symbol | |
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| ID | 5211099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5156786 |
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| End bp | 5158153 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640597704 |
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| Product | Allergen V5/Tpx-1 family protein |
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| Protein accession | YP_001278410 |
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| Protein GI | 148658205 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATATT TTCTGCTCCT TCTCATGACG GGAATGGCGT TTTTCTCGAC GGTCCCTCAC
GCAACGGGTC GGAGTGCTGA ACGCTGCTTC TCTGAAACCG GCTTTTGCAT CTCAGGACGC
ATACGATCAT TCTGGGAACA GAACGGCGGA TTACCGGTGT TTGGTTTTCC CACAGGACCT
GAGCAAGGCA TGGCTATTGA AGGGCGTATA GTGCGCGCGC AGCAATTTGA GCGCAATCGC
CTCGAACTGC ATCCAGGCAA TCGTCCGCCC TACGATGTCT TACTGGGAAG ACTGGGCGCC
GAGCGTCTCT CTCAAATGGG ACGCGACTGG CAATCCTTTC CGCAGAGTCA GCCACAACCA
GGATGCCGTT TCTTTCCAGA GACAGGTCAC AATGTGTGTG GGGATATTCT TGCTGCATGG
CGGGCGAATG GACTTGAACT CGATGGTCGG CGTGGTACGA CCGAGGCTGA GAGTCTGGCG
CTCTTCGGTT TGCCGTTGAG CGATCTTGTT TCAGAAACAC TGAGCGATGG CAAAACGTAT
CAGGTGCAGT GGTTCGAGCG TGCGCGATTC GAGTTGCATC CGGAACTTGC TCCTCCTTAC
CATGTCTTGT TGGGGTTGCT GGGCAATGAA ACTCGGCACA GTGGGCAGGC ATCGCAACAA
CCATCCCTCC CATCGAATGA CTGGCTCGCA CAGGTCAATG CATATCGCGC CCGTGCTGGT
GTTCCGCCGG TCACTGCCGA TCCGACTTTG AATGACAATT GTGTTCAACA TGCGCGCTAT
ATGGCGGAAA ACGGAGTGCT GACCCATGAC CAGAATCCGT CGCTTCCCTG GGCTTCTGGA
GCAGGGCAGA CATGTGCCCA GAAAGGAAAT GTCTGGCTGG GTTCGGGCAA CGTCTGGAAA
CCGCTGGACG CGATAGATGG CTGGATGATG TCGGTTGGAC ATCGGGCCTG GTTGCTGTAT
CCAACGACTC CGACCTTTGG GTTCGGATTT TACCAAACGA GAGGGGTCAG CGCTGCCGGG
TTGGATGTTC TGACACATGC TCGATTGGAT CAGGATACGA CCTTCCCCGG TTGGCCAGTA
CGGTATCCTG GAGGCGATCA GCAGGATGTC CCTCCGATAC AGTTGCCAAT TACCCTGTTC
TGGCCATACT TTGGTCCGAC GCCTGTTATC AGCAGTGTAA GCCTGCGCAC AGGGTCAGGA
ATGTCACTGC CCCATTCTGC AACAACGAAC CTTCCTGCCG GTCACAAAGG CGTGGCTATC
ATACCCGCTC AGGCGCTGCC GCCATTTACG ACCATTGAAG CAACGGTCAC CGGAACCTAT
GATGGTCGAC CTTTCAACGT CACATGGCAA TTCACAACCC GCAGATGA
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| Protein sequence | MRYFLLLLMT GMAFFSTVPH ATGRSAERCF SETGFCISGR IRSFWEQNGG LPVFGFPTGP
EQGMAIEGRI VRAQQFERNR LELHPGNRPP YDVLLGRLGA ERLSQMGRDW QSFPQSQPQP
GCRFFPETGH NVCGDILAAW RANGLELDGR RGTTEAESLA LFGLPLSDLV SETLSDGKTY
QVQWFERARF ELHPELAPPY HVLLGLLGNE TRHSGQASQQ PSLPSNDWLA QVNAYRARAG
VPPVTADPTL NDNCVQHARY MAENGVLTHD QNPSLPWASG AGQTCAQKGN VWLGSGNVWK
PLDAIDGWMM SVGHRAWLLY PTTPTFGFGF YQTRGVSAAG LDVLTHARLD QDTTFPGWPV
RYPGGDQQDV PPIQLPITLF WPYFGPTPVI SSVSLRTGSG MSLPHSATTN LPAGHKGVAI
IPAQALPPFT TIEATVTGTY DGRPFNVTWQ FTTRR
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