| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4104 |
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| Symbol | |
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| ID | 5211087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5143989 |
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| End bp | 5145401 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640597692 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001278398 |
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| Protein GI | 148658193 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATG TTCGTCTGCT TACGGTTCTC ATGCTGCTGG CAGCGATAAT CCTCGCAGCC
TGCGGCGCTC CGGCGGCTAC GCCGCCGACG CAACCGCCTG CGCCGACGCA ACCGCCTGCG
CCGACGCAAC CACCTGCGCC GACGCAACCA CCTGCGCCAA CTCCAGCGCC GACCGAAGCA
ACGGCAGCGG CACGCCTGAC GTGCACTGAA CCGGTGAAGG TGGGATTGAT TACAGATGTC
TCTGGGACTC TTGCCATCTA TGGCGCGCAT ATTCTGCGTT CGTTCATGCT CGGCATGGAG
TATATGGCTG GCGCACCAGG CGCAGCAGGC GAGAAGTTCG ATTTCAATAC TGCCAAAGAG
AATACCTTCA AGGTGGATGA CTGCGAGATT CAGGTCTTTG TGCGCGACGA TGCCAGCAAC
CCGCAGAATA CTGCCACTAT CGCACGTGAA CTGATCGATG TGAACAAGGT CAACATCCTG
GTCGGCACTG TTTCGTCAGG TGCGACGGCA ACGCTTCAGG GAATCGCCTT CGAGAACAAG
ATCCCGCTCA TTGTTGCTCC GGCTGCCGCC AATGACATTA CCGGCAAGGA TTTCAATATC
TATACCTTCC GCGTGAGTCG CAACAACTAT CAGGATGCAA TGAACGTCTG CACGTATCTC
ACCCAGAAGT ACAAGAAATT CGTGCAGATT GCGCCGGATT ACGCCTTTGG TCGCGGATCA
GCGGCAGCTT TCCGCGATGC GTGCGGCAAA CTCGGCGGTG AGTTCGTTGC CGACGATATT
TTTGCACCGG CGGATACCAC CGACTTTACG CCTTATATGG AGCGGATTCT GAACTCAGGC
GCGGAGGCGT ACATCGTCAC CTGGGCTGGT TCTGGCTTTG TACCGCTCTT CCAGGCTGCG
AACGATCTCG GTGTGAACGA TAAGATGAGT CTGGCATCCG CTTTCATCGA TAATGCCCTG
ATGCCGGTCT TCTACGGCGG GGCGGTTGGC TCGACCAGCG GCATTGTTTA CCACTACACC
GCGCCGAAGA ATCCGGCGAA TGATTTCCTC GTCGCCAATA CCAAACCACG CTATGGCGTC
AACCCCGACA TTTTCGACGC CGACGGCATG AATGCCGCCA TCTTGCTGGT CGAAGCTTTA
CGCAAGACGG GTAGCGATGT CGGCAGCGAA GCGCTCATCA AAGCGATGGA AGGCATGTCG
TTTGAAGGAC CGAAGGGAAC GGTTTACATC CGTCCCGAAG ACCATGTGGC CATTCAGGAC
ATGTACATCC TCAAACTGAC CAACCTGACC GATCCGGACG CGAAGTTCTA TGAGTATGTC
GCCACAACTC GCCCGGAGCC GCCCTGTCTG CTGCCCGAAA ATCTCAAGGA ACGATGCGGC
AGCCTTCCCT ATGGCAGCCT GAGCGGTCAG TAA
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| Protein sequence | MNHVRLLTVL MLLAAIILAA CGAPAATPPT QPPAPTQPPA PTQPPAPTQP PAPTPAPTEA
TAAARLTCTE PVKVGLITDV SGTLAIYGAH ILRSFMLGME YMAGAPGAAG EKFDFNTAKE
NTFKVDDCEI QVFVRDDASN PQNTATIARE LIDVNKVNIL VGTVSSGATA TLQGIAFENK
IPLIVAPAAA NDITGKDFNI YTFRVSRNNY QDAMNVCTYL TQKYKKFVQI APDYAFGRGS
AAAFRDACGK LGGEFVADDI FAPADTTDFT PYMERILNSG AEAYIVTWAG SGFVPLFQAA
NDLGVNDKMS LASAFIDNAL MPVFYGGAVG STSGIVYHYT APKNPANDFL VANTKPRYGV
NPDIFDADGM NAAILLVEAL RKTGSDVGSE ALIKAMEGMS FEGPKGTVYI RPEDHVAIQD
MYILKLTNLT DPDAKFYEYV ATTRPEPPCL LPENLKERCG SLPYGSLSGQ
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