Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4103 |
Symbol | |
ID | 5211086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5142597 |
End bp | 5143259 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640597691 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_001278397 |
Protein GI | 148658192 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCGGA TGGAAGAACC CCCTGACGTT GTCATCCGGC GATTGCCGTT GTATGCACGC AGTCTTCGTT ATCTGCTCCA GGAAGGAGTT GAGTCTGTTT CCTCGCAGGA ACTCGGGGAC CGGATCAATG TCACCGCTGC GCAGATCCGC AAAGATCTCT CGTACTTCGG CGAATTTGGC AAGCAGGGCA TTGGTTACAA CGTTCGGAAA CTTCTCCAGC AGATCGAAGA CATTCTTGGT CTGACGCGCG AGTGGCCCGT AGCAGTGGTA GGCATCGGTC ACCTTGGCGA AGCGATTGCC CGCTATGAAG GGTTTCGCCA GCAAGGCATC CGTATCGCTG GGCTGTTCGA TAGCAACCCC TCGAAGATCG GCACGGTCAT TGATGGCATG ACGGTTCAGA GTATCGAGGA AGCCGATCGC ATTATCAGGG AGCAGGGTAT TCGCCTGGCG ATCATCGCGG TTCCAGCACG CAGCGCGCAG GAAGTGACCG ATCGCCTGGT TATGGCGGGG GTGCGCGCCA TCCTGAGTTA TGCGCCAACG GTACTTCAAG TGCCGGATGG GGTCTGGGTA CGCTACATCG ATCCGGTCGC AATTCTCCAT AGTATGACCT ACTATCTCGC ACGCGACATT AACAGTGCGC GGCACAACAG TCCCGAAAGT TAG
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Protein sequence | MDRMEEPPDV VIRRLPLYAR SLRYLLQEGV ESVSSQELGD RINVTAAQIR KDLSYFGEFG KQGIGYNVRK LLQQIEDILG LTREWPVAVV GIGHLGEAIA RYEGFRQQGI RIAGLFDSNP SKIGTVIDGM TVQSIEEADR IIREQGIRLA IIAVPARSAQ EVTDRLVMAG VRAILSYAPT VLQVPDGVWV RYIDPVAILH SMTYYLARDI NSARHNSPES
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