Gene RoseRS_4103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4103 
Symbol 
ID5211086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5142597 
End bp5143259 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID640597691 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001278397 
Protein GI148658192 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGGA TGGAAGAACC CCCTGACGTT GTCATCCGGC GATTGCCGTT GTATGCACGC 
AGTCTTCGTT ATCTGCTCCA GGAAGGAGTT GAGTCTGTTT CCTCGCAGGA ACTCGGGGAC
CGGATCAATG TCACCGCTGC GCAGATCCGC AAAGATCTCT CGTACTTCGG CGAATTTGGC
AAGCAGGGCA TTGGTTACAA CGTTCGGAAA CTTCTCCAGC AGATCGAAGA CATTCTTGGT
CTGACGCGCG AGTGGCCCGT AGCAGTGGTA GGCATCGGTC ACCTTGGCGA AGCGATTGCC
CGCTATGAAG GGTTTCGCCA GCAAGGCATC CGTATCGCTG GGCTGTTCGA TAGCAACCCC
TCGAAGATCG GCACGGTCAT TGATGGCATG ACGGTTCAGA GTATCGAGGA AGCCGATCGC
ATTATCAGGG AGCAGGGTAT TCGCCTGGCG ATCATCGCGG TTCCAGCACG CAGCGCGCAG
GAAGTGACCG ATCGCCTGGT TATGGCGGGG GTGCGCGCCA TCCTGAGTTA TGCGCCAACG
GTACTTCAAG TGCCGGATGG GGTCTGGGTA CGCTACATCG ATCCGGTCGC AATTCTCCAT
AGTATGACCT ACTATCTCGC ACGCGACATT AACAGTGCGC GGCACAACAG TCCCGAAAGT
TAG
 
Protein sequence
MDRMEEPPDV VIRRLPLYAR SLRYLLQEGV ESVSSQELGD RINVTAAQIR KDLSYFGEFG 
KQGIGYNVRK LLQQIEDILG LTREWPVAVV GIGHLGEAIA RYEGFRQQGI RIAGLFDSNP
SKIGTVIDGM TVQSIEEADR IIREQGIRLA IIAVPARSAQ EVTDRLVMAG VRAILSYAPT
VLQVPDGVWV RYIDPVAILH SMTYYLARDI NSARHNSPES