| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4097 |
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| Symbol | |
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| ID | 5211080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5138239 |
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| End bp | 5138820 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640597685 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001278391 |
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| Protein GI | 148658186 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0293941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA CGCTTCACAC AACACCGCTC CCCGGTGCGA TCATCATCGA ACCGGCGTGC
TTCCGCGATG AACGCGGTTT TTTTCTGGAA TCCTGGAACC GGCGCGATTT TGCAGCGCAC
GGCATTACCA TCGACTTTGT GCAGGATAAC CACTCGCGCT CGGTGAAGCA TGTCCTGCGC
GGTTTTCACT ACCAGGATAT GACCGCACCC ATGGTCAAGC TGGTGCGCTG CACGCTCGGC
AGCGTTCTCG ACGTTATTGT CGATCTCCGG GTTGGTTCAC CCACGTTTGG GCGCTGGCAT
GCGGTCGAAT TGACGGCGGA GAATATGTTG CAGTTGCTGG TTCCGGTCGG TTTTGGTCAT
GCCTTTCTCA CCCTCTCCGA TGTTGCTGAG ATTCAGTATA AATGCAGTGC CTACTATACG
CCTTCCGCCG AAGGAGTCAT CACCTGGAAC GATCCTGATA TTGGGGTCGA CTGGCCCGTG
ACCGAACCGA TTCTCTCGCA GCGCGACCGA CGAGGGATGC GGTTGGCGGA GTATCTGGAA
CGTCCGGCGT TCAGGTTTGA GGAGGGGAAC GTTGGGCGTT GA
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| Protein sequence | MQFTLHTTPL PGAIIIEPAC FRDERGFFLE SWNRRDFAAH GITIDFVQDN HSRSVKHVLR
GFHYQDMTAP MVKLVRCTLG SVLDVIVDLR VGSPTFGRWH AVELTAENML QLLVPVGFGH
AFLTLSDVAE IQYKCSAYYT PSAEGVITWN DPDIGVDWPV TEPILSQRDR RGMRLAEYLE
RPAFRFEEGN VGR
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