| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4096 |
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| Symbol | |
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| ID | 5211079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5137049 |
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| End bp | 5137900 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597684 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001278390 |
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| Protein GI | 148658185 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00286363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.763291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTC TGGTCTCTAC ACGAACCGAG GGCATTTTTG CGCTTTTGAA TCCGCTGCAT
CTGGCGCGCA CGCTGTGGCG ACATCGCGAC CTGATCGTGC AGTTGACCCG CCGTGAGATC
GAGGGGCGTT ATCGCGGCGC ATACCTTGGC ATCCTCTGGT TGCTGGCGCA CCCGCTGCTT
ATGCTGACCG TCTACACGCT GGTGTTCGGC GTCATTTTTC AGAGTCGCTG GCCCCAGGCG
CGCAGCGACA GCCTGGCAGA TTTTGCGCTG ATTCTGTTTG CCGGGTTGTC GGCGTACTCC
TGTTTCAGCG AAACGGTCAG TCGTGCCGCC GGGTCAATCG TGAGCGTACC AAACTATGTG
AAGAAGGTGA TCTTTCCGCT GGAAGTGTTG CCGGTCAGCA TTCTCGGTGC GGCGCTGTTC
CATATGCTGG TGAGCATCGG CGTGCTGCTG GTCGCACACC TGGCACTTGG CGGCGGCATG
CCGTGGACGG TCATTCTTCT GCCGCTCGTC AGCCTGCCGC TCATCTTTCT TGCCCTGGGC
ATCGCCTGGT TTGTCGCCAG CCTGGGGGTC TACATTCGCG ATGTGGGGCA GGCAATCGGG
ATCGTGTTGC AGGTGATGTT TTTCCTGACG CCGATCTTCT ATTCGATCGA GATAATCCCG
GAGCCATTTC GCACGCTGGT GCTGCTCAAC CCGATGGCGC CGGTGACCGA AAATTTCCGC
CGGGTGCTGC TGTGGGGGCA GTTGCCCAGC TTCCCCGGCA CGCTCTGGTG GATCCTGGGA
ACCGGCGTGG TGATGATGTT GGGGTATGCG TGGTTTATGA AAACACGAAA AGGGTTTGCG
GATGTGTTGT GA
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| Protein sequence | MAVLVSTRTE GIFALLNPLH LARTLWRHRD LIVQLTRREI EGRYRGAYLG ILWLLAHPLL
MLTVYTLVFG VIFQSRWPQA RSDSLADFAL ILFAGLSAYS CFSETVSRAA GSIVSVPNYV
KKVIFPLEVL PVSILGAALF HMLVSIGVLL VAHLALGGGM PWTVILLPLV SLPLIFLALG
IAWFVASLGV YIRDVGQAIG IVLQVMFFLT PIFYSIEIIP EPFRTLVLLN PMAPVTENFR
RVLLWGQLPS FPGTLWWILG TGVVMMLGYA WFMKTRKGFA DVL
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