| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4086 |
|---|
| Symbol | |
|---|
| ID | 5211069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5123450 |
|---|
| End bp | 5124199 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640597674 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001278380 |
|---|
| Protein GI | 148658175 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.315577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.173874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTGA TCACAAGAAA CGGTGTGGAT AGTCGTCGTT TGACTCAAAA CGCAGAACAC
TTTGATGCCA TTGCCGGCAG TGTCTACGAT GAGAGCATCC CGGAGCACAT CATGCGGCAT
TTGACTAGGC GTCGTGTCAA TCTTGTACGA CGGGTGTTGC CTGCTGGTGG TGTATTGGAT
GTTGGTTGCG GCACGGGACG CTTTTTGAGC GCTCTCCCCT CGGATGTGTA TCAGCGGTTT
GGTATAGATG TATCGCCTGG CATGATTCGG ACTGCTTATC ATAGGGACGC TTCGTTACGG
TGTTGTGTCG CCAGTGGTAC TGCTCTTCCT TATGCAGATG AGAGTTTTGA CGTTGTGTTC
TGTGCAGCAG TACTGCATCA TATTGCTGAT CCTGTGGCAG TAAAGCAGAC GATTGTGGAG
ATCATACGAG TTCTTCGAAG AGGCGGCTTT GCTGTTATTT GGGACCACAA TCCGTTGAAC
CCATACTGGC CCCTACTTAT GCGCCGTGTA CCGCAGGATA CTGGTGATGA ACGCCTTATA
CCGCGGCGTG AAATAGCAGC AGCACTCAGT GATATCAGTG GAATGTATCC TCTCAACGTC
CGATGGCGTT GCATGACCTT CATCCCCGAT TTTGCCCCAG AGTGGGGTTT GCCAGTGTGG
AGATGGATGG AACAGATTCT TGAACAGATA CCTCTCATTC GCAATCTTGC GGCTCACAAT
GTCGCTCTGG TATATCGACT ACCGACTTAG
|
|---|
| Protein sequence | MFLITRNGVD SRRLTQNAEH FDAIAGSVYD ESIPEHIMRH LTRRRVNLVR RVLPAGGVLD
VGCGTGRFLS ALPSDVYQRF GIDVSPGMIR TAYHRDASLR CCVASGTALP YADESFDVVF
CAAVLHHIAD PVAVKQTIVE IIRVLRRGGF AVIWDHNPLN PYWPLLMRRV PQDTGDERLI
PRREIAAALS DISGMYPLNV RWRCMTFIPD FAPEWGLPVW RWMEQILEQI PLIRNLAAHN
VALVYRLPT
|
|---|
| |