Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4074 |
Symbol | |
ID | 5211057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5106693 |
End bp | 5109014 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640597662 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001278368 |
Protein GI | 148658163 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA CGGAAGATGG CACGCAGGGG CTTGCCAAAA AACCTACCCC TGTGAGGTTC CCCCCCCACC CCCTCGATCC GGCACGCCCG GTCTATGGCT ACGCACCTGC CGATCCATCG GCGCAGCCGG TGGTCAGCAT TGTGACCCCC TGCTACAACG CAGGGGCAAT GTTCCTCGAT ACCATCGCCT CGGTGCTGCG CCAGTCGTTG CAGCAGTGGG AGTGGATCAT CGTCAACGAT GGGTCGGATG ATGCGGCGAC GCTGCGGGTG CTGGGTGCGC TGCGCGCCTC GCCTGACCCG CGGATTCGGG TGGTCGATCA GCCGAACTAC GGTCCGGCGG CAGCGCGCAA TGCTGGCGTC GCAGTCAGTC GCGCGCCGCT GCTCTTCTTC CTCGACAGCG ACGATCTGCT GGCGCCGACG GCGCTGGAGC AACTCGCCTG GGCGCTGACG GCGCACCCGG AGGTTGCCGC AGTCACAACC TGGTACGTGC TCTTTGGCGC GATGCAGGGC CTGTTACGGC GTGGGTTTGC GTCGCGCCAT ACGTTTCCCC ACGACAATCC GCTGACGGTC AGTGTGATGC TGCGCCGCAC GGCGTTCGAG CGCATCGGCG GGTTCGATGA GAGTCTGCGC CATGGGCTGG AAGATTATGA GTTCTGGGTG CGCCTGGCGG ACGCCGGGAT GTGGGGATGC AACATCCACG AGGCGCTGGT CTGGATCCGT CGCAAGTCGG CAGACATGTA TCGCGGGTAT CGCTGGAACT TTCAGACTGA TCGCGCGGCG CTGGCACGTA TGCGCCGTGC CCTGCGCGCG CGCTATCCGC GTGTGTTCCG CGACGGTCCG CCGCGTCCGC CGGGTGAGCC GTCGCCGATC CTGCAACCGC ATCCGTTGAT CATGCCCGAC CCGCCGTTCG AGAATCGTCT GGCGCCACGG GGTGAGCGTC GGGTGTTGCT GCTGCTGCCC TGGGTCGAGG TAGGGGGAGC GGATCGCTTC AGCATCGATC TGGCGGATGG GTTGCGCGCG CGGAATTGCC GCGTGACGGC GTGCCTGTTG CGCCCGTCGG CGAATCCGTG GAAGCATGAA CTGATCATGG CGGCGCACGA GGTCTTCGAT CTGCCGCTGT TTCTGGCGTT TGCCGATTAT CCGCGCTTTC TGCGGTACCT GGTCGAGTCG CGCGGCATCA CGACGGTGGT GGTGCATAAC GATCTGTTCG CCTATCGTTT GTTGCCATTC CTGCGCGCCT GGTGTCCACA GGTGACGGTG ATCGATTTTC TGCATATTGT GCAGGATCAT TACCACGGCG GCGTCCCGCG CGCGGCGCTG GAGTACCGTT CACTGATCGA TCTGCACGTT GCGGCGTCGC ATCAGGTGCG CGAGTGGATG GTTGCACACG GCGCCGATCC AGAACGGGTC GATGTCTGTT CGATCAATGT GGATACGCAG CGCTGGAAGC CCGATCCTGC GCTGCGCGAC CGGGTGCGCG CGGAGTTGGG GTTGCGCGTC GATGAACCGG TCGTGTTGTT TGTCGGGCGC CTGGTTCCGC AGAAACGCCC GCGCCTGGTT GTGGAGATTG CGCGCGCGCT GGTGGAGCGT GGCGTCCACT GCACCTTCCT GGTGATCGGG GATGGTCCCG ACAGGGGATG GATGCAGCGC TTCGTGCGCC GACACCGGCT TGAAGGTCGT GTGCGCCTGT TGGGTTCGGT GTCGTCGACG CGGGTGCGTG AGATGATGGC TGCTGGCGAC CTGCTGGTGC TGCCGTCGGA GAGTGAAGGA ATCGCATTTG TGCTATTTGA AGCGATGGCG ATGGCGCTTG TGCCGGTCGC TGCCGATGTT GGCGGGCAGC GCGAATTGGT GACGCCGGAG TGCGGCGTGC TGATCCCGCC GGGAGGCGAT CAGGTTGCAC AGTATGTCAC TGCGCTGGAG CGTCTGATCG CCGATCCGTC GCAACGTGCG GCGATGGCGA TGGCGGCGCG CACACGGGTG GTGGAACGGT TCGACCGGCG GCAGATGATT GATTGCATGC TGGCGCGGAT CGAGCGGGCG GAGACGCTGG CGCGCACCGC GCCGCGCCCG CTGGTTGATC GCGATCTGGG GCTGGCGAGC GCGTCGCTGG CGATCGAGTA TCTCCAGTTC CGTGAGGCAT TGCTGCGGCT TGCGCCGGTG CGCCGGGCGC GTGCAGTGCG CTGGTCGTCC GCCTGGCTCC GGCTGGCGCG TCTAATGCGG ATGCGGGCGT GGGTTGACCG TTTTGATCGG CGGATCTATG TGCTGCGCCG GGAGGTTATG TGGCGGATCA AGCGCGCGCT GGGGAGAGCG TATAATCGGT GA
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Protein sequence | MAETEDGTQG LAKKPTPVRF PPHPLDPARP VYGYAPADPS AQPVVSIVTP CYNAGAMFLD TIASVLRQSL QQWEWIIVND GSDDAATLRV LGALRASPDP RIRVVDQPNY GPAAARNAGV AVSRAPLLFF LDSDDLLAPT ALEQLAWALT AHPEVAAVTT WYVLFGAMQG LLRRGFASRH TFPHDNPLTV SVMLRRTAFE RIGGFDESLR HGLEDYEFWV RLADAGMWGC NIHEALVWIR RKSADMYRGY RWNFQTDRAA LARMRRALRA RYPRVFRDGP PRPPGEPSPI LQPHPLIMPD PPFENRLAPR GERRVLLLLP WVEVGGADRF SIDLADGLRA RNCRVTACLL RPSANPWKHE LIMAAHEVFD LPLFLAFADY PRFLRYLVES RGITTVVVHN DLFAYRLLPF LRAWCPQVTV IDFLHIVQDH YHGGVPRAAL EYRSLIDLHV AASHQVREWM VAHGADPERV DVCSINVDTQ RWKPDPALRD RVRAELGLRV DEPVVLFVGR LVPQKRPRLV VEIARALVER GVHCTFLVIG DGPDRGWMQR FVRRHRLEGR VRLLGSVSST RVREMMAAGD LLVLPSESEG IAFVLFEAMA MALVPVAADV GGQRELVTPE CGVLIPPGGD QVAQYVTALE RLIADPSQRA AMAMAARTRV VERFDRRQMI DCMLARIERA ETLARTAPRP LVDRDLGLAS ASLAIEYLQF REALLRLAPV RRARAVRWSS AWLRLARLMR MRAWVDRFDR RIYVLRREVM WRIKRALGRA YNR
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