Gene RoseRS_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4072 
Symbol 
ID5211055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5104413 
End bp5105225 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID640597660 
Productalpha/beta hydrolase fold 
Protein accessionYP_001278366 
Protein GI148658161 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.523651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACT TCACTTCGCA TGATCTCCAC CTCAGCGATG TACGGTTGCA TCTCTACCGT 
GGCGGGCATG GTCCCGCAGT CGTGCTGGTG CACGGGTTGA CCGACCATGC GCGCTACTGG
GCGCCGCTGG CGCGCGCACT GGCTGGCGAG TACGACGTGA TCGCCTACGA TGCGCGCGGG
CATGGGTTGT CCGATCCTTC GCCCAACGGC TATCACCTCG ACCTGCTCGC CGCCGATCTG
GCTGCGCTGG TCGAAGCCCT GGGATTGATG CGACCGGCAG TTATCGGGCA TTCGATGGGC
GCATCGACAG CGGCGATTGC CGCAGCAACC CATCCCGGCA TGTTCCGCTG CGTCATTCTG
GAAGACCCGC CCTGGCGCAG CGCATTGCCT GCCGATATGC CGGACGTGAC GACGACGCGC
GCCACGTGGC GAGAAGACCT GCTGGCGATG AAAACGATGG ACGATGCAGC GCTGCTGGCG
CGGTGTCGCG CCGAGTCGCC GGGGTGGAGC GACGAAGACT ACGCACTGTG GATGGAGTCG
AAGAAAGCCG TCAACCCCGA TGCGCTTGAC GTTCTTCCAT CGTTTGTGCG TTTGTGGCCC
GAAGATGTGC GCCGGATCGA CTGTCCGCTG CTGATCCTGA CCGGTGAGCC AGAACGGGGG
GCGCTTTTTG ACCCCGGCGC CGAACAGATC GTCCGGCAGG TGCGTCCTGA TGTACAGGTC
GTACGCATCC CTGGTGCAGG ACATCAGGTG CGCCGGGAAG GGTTTGTTGC GTATCTCAAT
GCCGTGAAGC GTTTTTTGAA GGATGCGGCG TGA
 
Protein sequence
MEHFTSHDLH LSDVRLHLYR GGHGPAVVLV HGLTDHARYW APLARALAGE YDVIAYDARG 
HGLSDPSPNG YHLDLLAADL AALVEALGLM RPAVIGHSMG ASTAAIAAAT HPGMFRCVIL
EDPPWRSALP ADMPDVTTTR ATWREDLLAM KTMDDAALLA RCRAESPGWS DEDYALWMES
KKAVNPDALD VLPSFVRLWP EDVRRIDCPL LILTGEPERG ALFDPGAEQI VRQVRPDVQV
VRIPGAGHQV RREGFVAYLN AVKRFLKDAA