Gene RoseRS_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4048 
Symbol 
ID5211031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5070586 
End bp5071386 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID640597636 
Producthypothetical protein 
Protein accessionYP_001278342 
Protein GI148658137 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG CAACAAAGGA CGATGCAACC AGGGGGCGGA CACGACGCAA TAAACGGCAA 
ACCGAAGATG AGCGTTTGCT GGCGCGTCCC CGCGCCAACA CCGATTTCCT CAGCACCGAC
ACCTGGCGGG TGCTGCGGAT TATGGGGGAG TTTGTCGATG GCTTCGAGAT GCTGGCGGAT
GTCGGTCCGG CGGTCACGAT TTTCGGATCG GCGCGCGTCG GCGTTGATGA CCCGATGTAT
CAGGCGGCAG TGGACGTGGC GCGGGCGCTC GGCGAGGCGG GTTTTGCGAT TATTACCGGC
GGCGGACCCG GCATTATGGA GGCGGGCAAC CGTGGCGCGC GCGAAGCGGG AGCGCGGTCG
GTCGGTCTCA ATATCGAACT CCCCTTTGAA CAACATCTCA ATCCGTATGT CGATACATCG
GTGACGTTCC GCTATTTTTT CGTGCGCAAG ATGATGCTGG TCAAGTATGC TCAGGCGTTC
GTGATCTTCC CTGGCGGATT CGGCACGCTC GATGAGTTGT TCGAGGCGTT GACGCTGGTG
CAAACCGGGA AGGTGCGCAA CTTTCCGATC ATTTTGTTCA ACAGCACGTA CTGGAACGGG
CTGCTGAACT GGATGCGCGA AACGGTGCTC CCGGCGCGCA AGATCGCCGC TGCCGACATC
GATCTGTTGA TTGTCAGCGA CTCGGTCGAT GAGGTGCGTG ACCTGATTGT ACGTTCGGCG
TATGATACGC AGTGGCGCAG CGGCACAGAG GCGGCGGCGC ATGAAGTGAC CCGTCGCGTC
CTCGGACGAC GATCAGAGTA G
 
Protein sequence
MDDATKDDAT RGRTRRNKRQ TEDERLLARP RANTDFLSTD TWRVLRIMGE FVDGFEMLAD 
VGPAVTIFGS ARVGVDDPMY QAAVDVARAL GEAGFAIITG GGPGIMEAGN RGAREAGARS
VGLNIELPFE QHLNPYVDTS VTFRYFFVRK MMLVKYAQAF VIFPGGFGTL DELFEALTLV
QTGKVRNFPI ILFNSTYWNG LLNWMRETVL PARKIAAADI DLLIVSDSVD EVRDLIVRSA
YDTQWRSGTE AAAHEVTRRV LGRRSE