Gene RoseRS_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4038 
Symbol 
ID5211021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5057444 
End bp5058718 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content60% 
IMG OID640597626 
Productcystathionine gamma-synthase 
Protein accessionYP_001278332 
Protein GI148658127 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.682768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GCAAACCGGA AGGATACCTG AATGGACGAC CGCTGCACCC TGAAAGCCTG 
ATGATGAGTT ATGGCTACCG ACCCGAATGG TCAGAAGGCG CCGCCAAGAT CCCGATCTTC
CAGACCTCGA CATTTATCTT CACGTCTGCC GAAGAGGGCA AAGCGTTCTT TGAACTGGCG
TATGGTCTGC GGTCACAACG CGATGGGGAG CAGATGGGGC TGATCTACAG TCGCCTCAAC
AACCCCGATC TCGAAATTCT CGAAGACCGC CTGACCCTGT GGGACGACGC AGAAGCTGCG
GCAGTCTTCG CCAGCGGCAT GGCAGCGATC ACCACCACGC TGCTGACCTT TCTGCGTCCG
GGTGATGTGT TGCTCCACAG CGAGCCGGTG TACGGCGGCA CTGATTTCCT CTTCAAACAC
ATTCTGCCGC AGTTTGGCAT CCGCGTGGTT GGATTTCGCG CCGGTACGCC GCCGGAACAG
GTGGAACTCC ACCTTCGTCG CCTCGGGCTT ATCGAACGCC TGGCGCTGAT CTTCATCGAA
ACGCCCGCCA ACCCGACGAA CGACTTGGTC GATATTGCTG CTTTCGCTGC GCTGGCGCGG
CAACTGAGCA GTGCACGCCG CATCCTCACC GCCGTGGATA ACACCTTCCT GGGTCCGCTC
TGGCAACAAC CACTCAGGTA CGGCGCCGAC CTGGTGCTCT ATTCCGCCAC CAAATACATC
GGCGGGCACA GCGATGTCAT TGCCGGCGTC TGCCTGGGAA GCCGCGAATT GCTGGCGCAG
GTCAAAGTGC TGCGCACCAT CTTCGGCACC ATGGCCGGAC CGCATACCGG CTGGTTGTTG
CTGCGCAGCC TGGAAACACT CAAGTTGCGC ATGACCGCGC AGATGAAAAC CGCACGCCAT
GTAGCCGCAT TCCTGACCGA CCATCCAAAG GTGGCGCGTG TCTATTACCT GGGCAATCTG
ACCGGGGACG ACCCGCAGTA CGCGGTGTAC CAGCGTCAGT GCAGCGCTCC GGGCGGTATG
ATCTCGTTCG AGGTCGTCGG TGGCGAAGCA GAGGCGTTTC GACTGCTGAA CGCGCTCAAA
CTGATCCGTC TGGCAGTCAG TCTGGGAGGC ACTGAGTCGC TTGCAGAGCA TCCGGCAACA
ATGACCCACG CCGATGTCGA TCCGGAAGAG CGACTGGAAC TGGGAATCAC CCCGGCAATG
ATCCGCCTCT CGGTTGGCGT CGAGCATCCA GACGACCTGA TTGCTGATCT GGCGCAGGCG
CTGGAGGCAG TGTAA
 
Protein sequence
MAERKPEGYL NGRPLHPESL MMSYGYRPEW SEGAAKIPIF QTSTFIFTSA EEGKAFFELA 
YGLRSQRDGE QMGLIYSRLN NPDLEILEDR LTLWDDAEAA AVFASGMAAI TTTLLTFLRP
GDVLLHSEPV YGGTDFLFKH ILPQFGIRVV GFRAGTPPEQ VELHLRRLGL IERLALIFIE
TPANPTNDLV DIAAFAALAR QLSSARRILT AVDNTFLGPL WQQPLRYGAD LVLYSATKYI
GGHSDVIAGV CLGSRELLAQ VKVLRTIFGT MAGPHTGWLL LRSLETLKLR MTAQMKTARH
VAAFLTDHPK VARVYYLGNL TGDDPQYAVY QRQCSAPGGM ISFEVVGGEA EAFRLLNALK
LIRLAVSLGG TESLAEHPAT MTHADVDPEE RLELGITPAM IRLSVGVEHP DDLIADLAQA
LEAV