Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4038 |
Symbol | |
ID | 5211021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5057444 |
End bp | 5058718 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597626 |
Product | cystathionine gamma-synthase |
Protein accession | YP_001278332 |
Protein GI | 148658127 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.682768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGC GCAAACCGGA AGGATACCTG AATGGACGAC CGCTGCACCC TGAAAGCCTG ATGATGAGTT ATGGCTACCG ACCCGAATGG TCAGAAGGCG CCGCCAAGAT CCCGATCTTC CAGACCTCGA CATTTATCTT CACGTCTGCC GAAGAGGGCA AAGCGTTCTT TGAACTGGCG TATGGTCTGC GGTCACAACG CGATGGGGAG CAGATGGGGC TGATCTACAG TCGCCTCAAC AACCCCGATC TCGAAATTCT CGAAGACCGC CTGACCCTGT GGGACGACGC AGAAGCTGCG GCAGTCTTCG CCAGCGGCAT GGCAGCGATC ACCACCACGC TGCTGACCTT TCTGCGTCCG GGTGATGTGT TGCTCCACAG CGAGCCGGTG TACGGCGGCA CTGATTTCCT CTTCAAACAC ATTCTGCCGC AGTTTGGCAT CCGCGTGGTT GGATTTCGCG CCGGTACGCC GCCGGAACAG GTGGAACTCC ACCTTCGTCG CCTCGGGCTT ATCGAACGCC TGGCGCTGAT CTTCATCGAA ACGCCCGCCA ACCCGACGAA CGACTTGGTC GATATTGCTG CTTTCGCTGC GCTGGCGCGG CAACTGAGCA GTGCACGCCG CATCCTCACC GCCGTGGATA ACACCTTCCT GGGTCCGCTC TGGCAACAAC CACTCAGGTA CGGCGCCGAC CTGGTGCTCT ATTCCGCCAC CAAATACATC GGCGGGCACA GCGATGTCAT TGCCGGCGTC TGCCTGGGAA GCCGCGAATT GCTGGCGCAG GTCAAAGTGC TGCGCACCAT CTTCGGCACC ATGGCCGGAC CGCATACCGG CTGGTTGTTG CTGCGCAGCC TGGAAACACT CAAGTTGCGC ATGACCGCGC AGATGAAAAC CGCACGCCAT GTAGCCGCAT TCCTGACCGA CCATCCAAAG GTGGCGCGTG TCTATTACCT GGGCAATCTG ACCGGGGACG ACCCGCAGTA CGCGGTGTAC CAGCGTCAGT GCAGCGCTCC GGGCGGTATG ATCTCGTTCG AGGTCGTCGG TGGCGAAGCA GAGGCGTTTC GACTGCTGAA CGCGCTCAAA CTGATCCGTC TGGCAGTCAG TCTGGGAGGC ACTGAGTCGC TTGCAGAGCA TCCGGCAACA ATGACCCACG CCGATGTCGA TCCGGAAGAG CGACTGGAAC TGGGAATCAC CCCGGCAATG ATCCGCCTCT CGGTTGGCGT CGAGCATCCA GACGACCTGA TTGCTGATCT GGCGCAGGCG CTGGAGGCAG TGTAA
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Protein sequence | MAERKPEGYL NGRPLHPESL MMSYGYRPEW SEGAAKIPIF QTSTFIFTSA EEGKAFFELA YGLRSQRDGE QMGLIYSRLN NPDLEILEDR LTLWDDAEAA AVFASGMAAI TTTLLTFLRP GDVLLHSEPV YGGTDFLFKH ILPQFGIRVV GFRAGTPPEQ VELHLRRLGL IERLALIFIE TPANPTNDLV DIAAFAALAR QLSSARRILT AVDNTFLGPL WQQPLRYGAD LVLYSATKYI GGHSDVIAGV CLGSRELLAQ VKVLRTIFGT MAGPHTGWLL LRSLETLKLR MTAQMKTARH VAAFLTDHPK VARVYYLGNL TGDDPQYAVY QRQCSAPGGM ISFEVVGGEA EAFRLLNALK LIRLAVSLGG TESLAEHPAT MTHADVDPEE RLELGITPAM IRLSVGVEHP DDLIADLAQA LEAV
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