| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4025 |
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| Symbol | |
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| ID | 5211008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5037105 |
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| End bp | 5041676 |
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| Gene Length | 4572 bp |
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| Protein Length | 1523 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640597614 |
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| Product | NB-ARC domain-containing protein |
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| Protein accession | YP_001278320 |
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| Protein GI | 148658115 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.284567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGG AACCGCTCTT CGCCGCTATC GCCGAAGCCG TCTTTGTCTA CCTGCTCCAG
GAGAGCACCC TGACAGAGCG CATCCGCGCC ACCCTTGGTC TTGACCCAAC GCGCCGCGCC
TTCCAGACCG CGCTGGCACG GGCATACACT GTCTTCGCCC GCCACTACCC GGAATGGACG
ACAACCCTCT TCGATCAACC GTTTCTCACC AGTCCAACCG TCGTTCCGCT GCTGGCTGAA
CTGCTCACCC GCCGCGGTCA ACCGGACCCG GCGCACCTGG CGCGTCTGTT CGCCGCACAC
CTCGGGCATC CCGACCCCGA CCGCTGGGAA CGGCTGGGTG ATGCCACCCG CGCCGCCGCC
GACTTTTTGA CCTGGCTGGA GGGCGAACTG GCACGCCAGG ACGCTCTGCA ACCCCTCTTC
GACAGCCGTG CGCTGGAGCG CATTGCCGAA CACACCGGGG CCATTCGCCG GGCGCTAGAA
GCGCTGGCGC ACAACCGGCA AACGGCAGCC GACCTCGATC TCCTGCGGCA GGCGCTGCGC
GATGGTCAGG TCGCTCTGGC GACCGGCGAG CGCGCCGTGG CTCTCGGTAG CAGCGCCGAC
AGCGTGGTCA TCGTTACTGG CGACGGCAAT ATCGTTCAGG TGCTGAATGT CCAACAGCGC
ACCGACCTGG AGCGCCTGCT GACCACCCGC CGTTATAACC TCCCCTCGCT GCCGGAGCAC
TATGTCCTGC GTGAAGCAGA CCTGGAACGG CTGCGGCAGG CGCTGCTGAA CAATGGCGCC
GTTGCCCTGG GCATTGTCGG CGTGAAGGGC ATGGGTGGCA TTGGCAAGTC GGTGCTGGCT
GCTGCCCTGG CCCGTGATCT TGCCGTGCAG GCCGCCTTTC CCGATGGCAT CGTCTGGCTG
CCCATCGGTC GCGAGCCAAA CCTGCCCGCC CGCCAGGAAG AACTCTACCT CTTTCTGACC
GGTCAGCGCG AGAACTTTCG CGACGCGATC CAGGGCCGCA GCTTCTTGAG CGTTGCACTG
GAGGGCAAGA CCTGCCTGGT GATCCTGGAC GACGTCTGGG ACTCCAGCCA CGCCGAAGCC
TTTCCCGTGG TGACCGGTTC GGCGACCCGT TACCTGATCA CCACCCGTAA CGCCGAGGTC
TTGCAGACGC TCAACGCGCC CCCCGTTTCG CTGGACGTAC TCAGCCCGGA TCAGGCATTG
AGTCTGCTGG CCGATTGGAC CGGGCAACCC GTTGCGAATC TGCCATCGAT AGCCTGCGAG
GTAGCGCGGG AGTGTGGCTA CCTGCCGCTG GCGCTGGCGA TGGTAGGCGC CTTCGTTCGC
CAGAACCCCG AAAGCTGGGA GCGGGCGCTG CACCGCCTGC AGACCGCTGA CCTGGCGAAA
CTCCGTCGCC TCTTCCCCGG CTACGAGCAC CCCACCCTGC TGGCGGCGCT CGAGGTGAGC
GTCGAGGCGA TGGCAGCGAC CGACCGCGCC CGCTACCTGG ACCTGGCCGT CTTCCCTGAA
GAGGCCGCGA TTCCGCTTCC CGTCCTGCAC GCCTTCTGGC AGCCGCTGGG GCTGGACGAA
GATGACGTAG CCGACCTGGC GGAGACCTTT GTGAACCGTT CGCTGGCGCG TCGGGACGAG
GATGGACGCC TGCGCCTGCA CGACCTGCAG CACGACTACC TGCGCGCCTG CGCGGGAGCG
AACCTGCCCG TCCTGCACCG TCGCTTCCTG CTCGCCTGCG CCCGGAGTTT CCTGGGCGCC
TCCGGTGAAA CGCTGGAAGG GCTGCCCTGG CATCGGCTGC CATCGCAACC CAACTACCTG
TGGGATCGGC TGGTCTATCA TCACCTACAG GCTGGCGCCT GGGACGCCAT CTATGCCCTG
CTGACCGATT TCGACTTCCT GGAAGCGCGC TGCCGGGCGA CGACCGTCTT CGAGCTGGAA
GCCGATTACC GACTGGCGCT GAACGCCTGG CCGCAGGAAG ATACCGCACG GCGCGAGGTG
CTGTCCGCTT TCGAGGAGCG CCTGCGCCTG GAAGCCTCGC GCATTGCCCA GGCGCCCGAA
TGGTTCTTCC CCGCTCTCTA CAACCATCTG CGCTGGCTAG ATGCACCGGA TGGTGGTCCC
CTGCATCGGC TGTGCGAAAC CGCTGCATTC CACCGCACGA ATTACCTGCG CTCCCGCCTC
GACCCGCGGC CCGAACCGCC GCTCTGGCTG CGCTCCCTGG AAGGCCATAC GCATTGGGTG
CTGGCCGTGG CGGTCAGCCC CGACGGGCGC ACCATCGTCA GCGGCTCTCA TGACCGCACG
GTGAAGGTGT GGGAGGCGGA AAGCGGGCGC CTGCTGCGCT CCCTGGAAGG CCATACGGGT
TCGGTGCGGG CCGTGGCGGT CAGCCCCGAC GGGCGCACCA TCGTCAGCGG CTCTCATGAC
CGCACGGTGA AGGTGTGGGA GGCGGAAAGC GGGCGCCTGC TGCGCTCCCT GGAAGGCCAT
ACGGGTTCGG TGCGGGCCGT GGCGGTCAGC CCCGACGGGC GCACCATCGT CAGCGGCTCT
CATGACCGCA CGGTGAAGGT GTGGGAGGCG GAAAGCGGGC GCCTGCTGCG CTCCCTGGAA
GGCCATACGG GTTCGGTGCG GGCCGTGGCG GTCAGCCCCG ACGGGCGCAC CATCGTCAGC
GGCTCTCATG ACCGCACGGT GAAGGTGTGG GACGCCGCAA GCGGGCGCCT GCTGCGCTCC
CTGAAAGGCC ATACGGGTTC GGTGCTGGCC GTGGCGGTCA GCCCCGACGG GCGCACCATC
GTCAGCGGCT CTCATGACCG CACGGTGAAG GTGTGGGAGG CGGAAAGCGG GCGCCTGCTG
CGCTCCCTGG AAGGCCATAC GGGTTCGGTG CGGGCCGTGG CGGTCAGCCC CGACGGGCGC
ACCATCGTCA GCGGGTCGTG GGATAACACG GTGAAGGTGT GGGAGGCGGA AAGCGGGCGC
CCGCTGCGCT CCCTGGAAGG CCATACGGGT TCGGTGCGGG CCGTGGCGGT CAGCCCCGAC
GGGCGCACCA TCGTCAGCGG CTCGGATGAC CGCACGGTGA AGGTGTGGGA GGCGGAAAGC
GGGCGCCTGC TGCGCTCCCT GGAAGGCCAT ACGGATTGGG TGCTGGCCGT GGCGGTCAGC
CCCGACGGGC GCACCATCGT CAGCGGGTCG CGTGACCGCA CGGTGAAGGT GTGGGAGGCG
GAAAGCGGGC GCCTGCTGCG CTCCCTGGAA GGCCATACGG GTTCGGTGCT GGCCGTGGCG
GTCAGCCCCG ACGGGCGCAC CATCGTCAGC GGCTCTCATG ACCGCACGGT GAAGGTGTGG
GAGGCGGAAA GCGGGCGCCT GCTGCGCTCC CTGGAAGGCC ATACGGATTG GGTGCGGGCC
GTGGCGGTCA GCCCCGACGG GCGCACCATC GTCAGCGGGT CGTGGGATAA CACGGTGAAG
GTGTGGGAGG CGGAAAGCGG GCGCCTGCTG CGCTCCCTGG AAGGCCATAC GGGTTCGGTG
CGGGCCGTGG CGGTCAGCCC CGACGGGCGC ACCATCGTCA GCGGCTCTCA TGACCGCACG
GTGAAGGTGT GGGACGCCGC AAGCGGGCGC CTGCTGCGCT CCCTGGAAGG CCATACGGAT
TGGGTGCTGG CCGTGGCGGT CAGCCCCGAC GGGCGCACCA TCGTCAGCGG CTCTCATGAC
CGCACGGTGA AGGTGTGGGA GGCGGAAAGC GGGCGCCTGC TGCGCTCCCT GGAAGGACAT
ACGGGCGGAG TGAACGCGGT GGCGGTCAGC CCCGACGGGC GCACCATCGT CAGCGGCTCG
GATGACCGCA CGGTGAAGGT GTGGGAGGCG GAAAGCGGGC GCCTGCTGCG CTCCCTGGAA
GGCCATACGG GTTCGGTGCT GGCCGTGGCG GTCAGCCCCG ACGGGCGCAC CATCGTCAGC
GGCTCGGATG ACCGCACGGT GAAGGTGTGG GAGGCGGAAA GCGGGCGCCT GCTGCGCTCC
CTGGAAGGCC ATACGGGTTC GGTGCTGGCC GTGGCGGTCA GCCCCGACGG GCGCACCATC
GTCAGCGGCT CGGATGACCG CACGGTGAAG GTGTGGGAGG CGGAAAGCGG GCGCCTGCTG
CGCTCCCTGG AAGGCCATAC GGATTGGGTG CGGGCCGTGG CGGTCAGCCC CGACGGGCGC
ACCATCGTCA GCGGGTCGTG GGATAACACG GTGAAGGTGT GGGAGGCGGA AAGCGGGCGC
CTGCTGCGCT CCCTGAAAGG CCATACGGGT TCGGTGCGGG CCGTGGCGGT CAGCCCCGAC
GGGCGCACCA TCGTCAGCGG GTCGTGGGAT AACACGGTGA AGGTGTGGGA GGCGGAAAGC
GGGCGCCTGC TGCGCTCCCT GGAAGGACAT ACGGGCGGAG TGAACGCGGT GGCGGTCAGC
CCCGACGGGC GCACCATCGT CAGCGGGTCG TGGGACCACA CGATCAGGGC CTGGAATCTG
GAAAGCGGCG AGTCGTGCGT ACTCTTCTGG AACGACGCTG CCATCCGCAG CCTGGCCCTT
TCCGGCGATG GTCAACTGCT GGTATGCGGT GATGTGTCTG GGCGGGTGTG GCTGTTTGAT
GTGGTGGGGT AG
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| Protein sequence | MLLEPLFAAI AEAVFVYLLQ ESTLTERIRA TLGLDPTRRA FQTALARAYT VFARHYPEWT
TTLFDQPFLT SPTVVPLLAE LLTRRGQPDP AHLARLFAAH LGHPDPDRWE RLGDATRAAA
DFLTWLEGEL ARQDALQPLF DSRALERIAE HTGAIRRALE ALAHNRQTAA DLDLLRQALR
DGQVALATGE RAVALGSSAD SVVIVTGDGN IVQVLNVQQR TDLERLLTTR RYNLPSLPEH
YVLREADLER LRQALLNNGA VALGIVGVKG MGGIGKSVLA AALARDLAVQ AAFPDGIVWL
PIGREPNLPA RQEELYLFLT GQRENFRDAI QGRSFLSVAL EGKTCLVILD DVWDSSHAEA
FPVVTGSATR YLITTRNAEV LQTLNAPPVS LDVLSPDQAL SLLADWTGQP VANLPSIACE
VARECGYLPL ALAMVGAFVR QNPESWERAL HRLQTADLAK LRRLFPGYEH PTLLAALEVS
VEAMAATDRA RYLDLAVFPE EAAIPLPVLH AFWQPLGLDE DDVADLAETF VNRSLARRDE
DGRLRLHDLQ HDYLRACAGA NLPVLHRRFL LACARSFLGA SGETLEGLPW HRLPSQPNYL
WDRLVYHHLQ AGAWDAIYAL LTDFDFLEAR CRATTVFELE ADYRLALNAW PQEDTARREV
LSAFEERLRL EASRIAQAPE WFFPALYNHL RWLDAPDGGP LHRLCETAAF HRTNYLRSRL
DPRPEPPLWL RSLEGHTHWV LAVAVSPDGR TIVSGSHDRT VKVWEAESGR LLRSLEGHTG
SVRAVAVSPD GRTIVSGSHD RTVKVWEAES GRLLRSLEGH TGSVRAVAVS PDGRTIVSGS
HDRTVKVWEA ESGRLLRSLE GHTGSVRAVA VSPDGRTIVS GSHDRTVKVW DAASGRLLRS
LKGHTGSVLA VAVSPDGRTI VSGSHDRTVK VWEAESGRLL RSLEGHTGSV RAVAVSPDGR
TIVSGSWDNT VKVWEAESGR PLRSLEGHTG SVRAVAVSPD GRTIVSGSDD RTVKVWEAES
GRLLRSLEGH TDWVLAVAVS PDGRTIVSGS RDRTVKVWEA ESGRLLRSLE GHTGSVLAVA
VSPDGRTIVS GSHDRTVKVW EAESGRLLRS LEGHTDWVRA VAVSPDGRTI VSGSWDNTVK
VWEAESGRLL RSLEGHTGSV RAVAVSPDGR TIVSGSHDRT VKVWDAASGR LLRSLEGHTD
WVLAVAVSPD GRTIVSGSHD RTVKVWEAES GRLLRSLEGH TGGVNAVAVS PDGRTIVSGS
DDRTVKVWEA ESGRLLRSLE GHTGSVLAVA VSPDGRTIVS GSDDRTVKVW EAESGRLLRS
LEGHTGSVLA VAVSPDGRTI VSGSDDRTVK VWEAESGRLL RSLEGHTDWV RAVAVSPDGR
TIVSGSWDNT VKVWEAESGR LLRSLKGHTG SVRAVAVSPD GRTIVSGSWD NTVKVWEAES
GRLLRSLEGH TGGVNAVAVS PDGRTIVSGS WDHTIRAWNL ESGESCVLFW NDAAIRSLAL
SGDGQLLVCG DVSGRVWLFD VVG
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