Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4020 |
Symbol | |
ID | 5211003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5029577 |
End bp | 5030902 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640597609 |
Product | zinc finger SWIM domain-containing protein |
Protein accession | YP_001278315 |
Protein GI | 148658110 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCA TCACTGCCGA AGAAGCCAAA GCCCTTGCCC CTGACCTGGC TTCGCTTAAA GCCGCTCAGG AACTGGCAGA TATTTGTCAT TGGGTCAGCC TGGGCGCCAA CGAAGCAGCC TTGTGGGGTG AATGCAAGGG CAGTGCACAA AAGCCATACA AGGTGCAGGT AGATCTGTCC AATCGCGGCT TTGCCTGCAC CTGTCCAAGT CGCAAATCTC CCTGTAAACA TGTCCTGGGA TTGATGCTGC TGGCATCGGC TTCGCCAACC ATATTGAAAG ATGCCACACC CCCTGCCTGG GTCTCTGAAT GGCTGGAAAA ACGCACCGAC CAGACGTCGG ATCACGCGGG ACAGGCTGAA CCCGACACTG CTTCGTCGCA GTCGCGTCAG AAAGACGCTG CACGCCGCGC CGCCAGACGT GAAAAACTGG TTGCTGCGGG TCTCGAAACG CTCGACCTCT GGCTCAAAGA CCTGATCCGC CAGGGCCTGG CTTTCGCCCA GAGTGCGCCG GCTTCGTTTT GGGAACAGCA ATCTGCCCGC CTGGTAGATG CCCAATTGCC TGGTGCGGCG CGGATGGTAC GCGAGATGCG GGACATTCCC GGCGCCTCCC CCAACTGGAC GGAAATTCTG CTCCTGAAAA TGGCGCGACT CCACCTGCTC ATCCAGGCCT ACCGTCGTCT GGAAAGCCTG CCCGAACCCT CACGCACCGA TGTGCGCACC CTGCTCGGCT GGACTATCAA TCGCAAGGAG TTGATCCTCT CTTCTCCCGC CCTGAGCGAT GACTGGCTGG TAGTGGCTCA GACCCTCGAG GAAGACGAGA CAAGTGGGTT GCGCACCCAA ATCAACTGGT TGTGGGGCAA AACCAGCCGC AAACCTGCTC AACTTATCCT CTTCGCTTTC AGAACCAGAC CCTTCGAAGA TCACCTTTTC CCTGGCCTGA CCTTGCGCGG TGATCTGGTT TACTTCCCCA GCGCATACCC CTTGCGAGCC GTTTTCAAAA GCTACCGGAG GCTGGAATCC ACTTTTGTTC CTGCTGGCTT GCCGAATTTT CTCGCCTTTC TCGATGCGTA TTCTACCGCG CTCGGCCTCA ACCCATGGTT AGAGCATTTT CCTGTCGTGT TGGAACATGT GACCATTGAA AGGTTGGAAA CAAACTGGCT TTTGTGTGAT GGTGAGAATC AGGCAATCCC CGTATCCTCC CGTTCCCACT GTTGGGAACT TCTTTCTCTT TCTGGCGGTC ACCCTCTCAC CGTTTTTGGC TTGTGGGACG GATTCTCATT TTTCCCCATG ACGGCCTGGG AGAACGAAAG GTTTGTTCGC CTATGA
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Protein sequence | MSSITAEEAK ALAPDLASLK AAQELADICH WVSLGANEAA LWGECKGSAQ KPYKVQVDLS NRGFACTCPS RKSPCKHVLG LMLLASASPT ILKDATPPAW VSEWLEKRTD QTSDHAGQAE PDTASSQSRQ KDAARRAARR EKLVAAGLET LDLWLKDLIR QGLAFAQSAP ASFWEQQSAR LVDAQLPGAA RMVREMRDIP GASPNWTEIL LLKMARLHLL IQAYRRLESL PEPSRTDVRT LLGWTINRKE LILSSPALSD DWLVVAQTLE EDETSGLRTQ INWLWGKTSR KPAQLILFAF RTRPFEDHLF PGLTLRGDLV YFPSAYPLRA VFKSYRRLES TFVPAGLPNF LAFLDAYSTA LGLNPWLEHF PVVLEHVTIE RLETNWLLCD GENQAIPVSS RSHCWELLSL SGGHPLTVFG LWDGFSFFPM TAWENERFVR L
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