| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4011 |
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| Symbol | |
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| ID | 5210994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5018827 |
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| End bp | 5019909 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597600 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001278306 |
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| Protein GI | 148658101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00243359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGGG GAATGGAAAA GAACAGTACA AGCCTTCCAC TCATTCTTCT CACCCTGCTG
ACAGGTATTG CGCTGGGATG GTTGCTCAAC GACCTGATGC GGCAACCGCC AGCGCCGCTG
GCGGTTGCCC CGACGCAAGC GCCGACGGCG ACCGCTCGTG CAACATCTGT ACTAACCGCA
CCGGTTCCAT CGTCAACAAT CGCACCCCAA TCGCCGGTCC CTTCACCGCC ACCTGCGGCG
ACGCCTCTGC TGGCGACCGC CATCCCGCCA ATTCCTACCG CATCCCCCCA ACCGCAGGTC
ATTGGCTACG TGGGGCATCG CGCTGCTGCT GGTGAAACCC TGGAACAGAT CGCAGCGCGC
TACCGCACCT CCCCGGCACT GATCAAAGCG TACAATATGA TCAATGCGCC GCTGCGCACC
GGGAGAGAAC TCGTCGTGCC GCTGATCGAA CCGGGCGATG CTGGCGAAGC GCTGCTGGTC
CAGCGTGGCA ATCCGATGCG CCCGTGGGTT GCGCTGACCC TCGACGCTGG CGCAGGTGCA
GCGCCAACGC CGCGCATCCT TGATGCGTTG CGCGTGCGCG GGATCACTAT CACCTTCTTC
CTGACCGGGC GCTGGATACG TGACAATCCC GGTCTGGTTC GCCGCATGGT GGCAGATGGG
CACGAACTCG CCAACCATAC GATGAACCAT CCTGATCTGA CAACCCTGGA CGACGAGGCG
ATTCGCCGCG AACTGAGCGA AACCGAGGCG ATCCTGCACG ACATCGCGCC GGATGCCGTC
ATACGCCCCT TCTTTCGACC GCCGTATGGC GCGTACAACG AGCGGGTCCT GCGTGTGGCG
CTATCAGAAG GATACCTGCC GGTCTACTGG TCGCTCGATA GTCTGGATTC GGTTGGGGAA
CCGAAGACGC CAGAGTTCCT CATCGCGCGG GTGACGCAAA AACTCAGCCC CGACGACCTG
CGCGGCGCAA TTATTCTGGC GCACTGCGGC AGTGATGCAA CCGCCGATGC GCTGCCGGAC
ATCCTGGACC GCTTTGCGGC GATGGGCTTC GAGGTGCGAA AACTCTCGGA CGTCATGCAG
TGA
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| Protein sequence | MDGGMEKNST SLPLILLTLL TGIALGWLLN DLMRQPPAPL AVAPTQAPTA TARATSVLTA
PVPSSTIAPQ SPVPSPPPAA TPLLATAIPP IPTASPQPQV IGYVGHRAAA GETLEQIAAR
YRTSPALIKA YNMINAPLRT GRELVVPLIE PGDAGEALLV QRGNPMRPWV ALTLDAGAGA
APTPRILDAL RVRGITITFF LTGRWIRDNP GLVRRMVADG HELANHTMNH PDLTTLDDEA
IRRELSETEA ILHDIAPDAV IRPFFRPPYG AYNERVLRVA LSEGYLPVYW SLDSLDSVGE
PKTPEFLIAR VTQKLSPDDL RGAIILAHCG SDATADALPD ILDRFAAMGF EVRKLSDVMQ
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