| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4010 |
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| Symbol | |
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| ID | 5210993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5017108 |
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| End bp | 5018319 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597599 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001278305 |
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| Protein GI | 148658100 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000079745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC GAGTGTTTCT TCGCAGCGTC GCGGCGGGCA GCGCAGCCCT GACAGCAGCC
ACACTGGCAG CGTGTGGTCA GGCGCCGCAG ACGCCAGTTC AGCAGGCGAC GACCGCCCCG
GCACAGCAGG CGACGACCGC CCCGGTACAG CAGGCAACGC AGGCGCCGGT CGCCACTGCG
CCACAACCGC AGGCGCCAGC GCAAACGAGC GAGATGCCCT CTCTTGAGTG GGATATGGCT
ACCAGCTGGC CCGTGGCGCT CGACACGATT TTCGGCGGAG CGAAGACAGT TGCTGACCGT
GTGGCGGCAT TGACAGACGG TAAGTTTAAA ATCACGCCAC GCGCTGCGGG CGAACTGGCG
CCTGCCTTGC AGGTGCTTGA TGTGGTGCAG CAGGATGCCG TGCCGATCGG TCACACCGCA
TCGTACTACT ATGTCGGCAA GAGTCCGGTG ACCGCGTTTG GCACTACGGT GCCCTTCGGT
CTCAACGCAC AGCAGCAAAA TGCCTGGTTG TACGACGGCG GCGGGCTGGA AAAATTGCAG
GCGGTGTACG CCAAACTGTT CAATGTTATT CAGTTCCCGG CGGGCAATAC CGGCGTCCAG
ATGGGTGGGT GGTTCCGCAA GGAGATCAAC ACCGTCGCCG ACCTTCAGGG TCTCAAGATG
CGCATCCCCG GTCTCGGCGG GCAGGTGTTG ACCAAACTGG GAGTCACCGT TCAGGTCATT
CCGGGTGGTG AGATCTTCCA GGCGTTGCAG ACCGGCGCGG TCGACGCGGC GGAATGGGTC
GGGCCGTATG ACGATGAGAA ACTCGGACTG AACAAGGCGG CGAAGTTCTA CTACTATCCG
GGCTGGTGGG AGCCGGGTCC TACACTCGAG GTGCAGGTCA ACCTCGACAG GTGGAACGAA
CTGCCAAAAG TCTACCAGGA GGCGATTAAG ACCGCATCCG CCGAGGCGAA TATCACGATG
CTGGCGCGGT ACGATGCGCG CAACCGTGAA GCGCTCAAGC GCCTGGTGGA CGGCGGCGCG
CAACTGCGCC CGTACAGCAA GGAAATCCTT GCCGCAGCCG AGAAAGCCGC CTTCGAACTG
TACGATGAGT TCGCCGCGAA AGACGCCGAC TTCAAGGAAA TCTACGAGGA GTGGAAGGCG
TTCCGCGAGG CCATCTATGA GTGGAACAAG GTGAACGAAG CCGGGTACAC CAACTACGCC
TACAATAAGT GA
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| Protein sequence | MRRRVFLRSV AAGSAALTAA TLAACGQAPQ TPVQQATTAP AQQATTAPVQ QATQAPVATA
PQPQAPAQTS EMPSLEWDMA TSWPVALDTI FGGAKTVADR VAALTDGKFK ITPRAAGELA
PALQVLDVVQ QDAVPIGHTA SYYYVGKSPV TAFGTTVPFG LNAQQQNAWL YDGGGLEKLQ
AVYAKLFNVI QFPAGNTGVQ MGGWFRKEIN TVADLQGLKM RIPGLGGQVL TKLGVTVQVI
PGGEIFQALQ TGAVDAAEWV GPYDDEKLGL NKAAKFYYYP GWWEPGPTLE VQVNLDRWNE
LPKVYQEAIK TASAEANITM LARYDARNRE ALKRLVDGGA QLRPYSKEIL AAAEKAAFEL
YDEFAAKDAD FKEIYEEWKA FREAIYEWNK VNEAGYTNYA YNK
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