| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4005 |
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| Symbol | |
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| ID | 5210988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5010167 |
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| End bp | 5011336 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597594 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001278300 |
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| Protein GI | 148658095 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.431376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG CGCTCGGATG GCTGCTTGTT ATTCCGCTGT TGCTGGCAGC ATGCGGTCAG
CAGGCAGCAC AGACGGGGCA ACCCGTCGAA GTCACCCGCA TTGTCGAAGT CACCCGCGTC
GTTGAAGTCA CCCCTGCAGG CGGAGCGGCT CTGGTTCAAC CGGCAGCAAC CCCCGCTCCC
GCTCCGGCGC CTGCCGCGCC AGCCGGTTTC GGTGAGACGC TCAAGGCGAT CCAGGCGCGC
GGCAAACTGA TCTGCGGCGT CAACAGCCAG GTGCCCGGTT TTGGTTTCGT TGACCCGACC
GGTGCGTTTA GCGGGTTCGA CATCGACTAC TGCAAGGCGC TGGCAGCAGC GATCTTCAAC
GATGTCAGCA AAGTGGAGTA TCGCCCGCTG ACTGCCGAGC AGCGTTTTGC CGCACTCCAG
AGCGGTGAAA TCGATGTGCT CATCCGCAAC ACCACCTGGA CGCTCACCCG TGATACCGAT
AACGGCGGCA ACTTTGTCGC TACCACGTTC TACGATGGTC AGGGCATCAT GGTACCGAAA
GCCTCGAACA TCACGAAACT CGAAGATCTG AACGGTGCGA CCATCTGTGT GCAGAAGGGG
ACCACGACAG AGTTGAACCT GGCGGATCAG ATGGCGGCGC GTAAACTTCA GTACACCCCT
GCCGTCTTTG AAGACGCCAA CAGCACCTTC GCCGCATATG CAGAAGAGCG CTGCGATGCG
GTGACAACCG ATAAATCCGG TCTGGTATCG CGCCGGTCGG TGCTGCCGAA CCCGGATGAT
CACGTCATCC TCGATGTCAC CCTGTCGAAG GAGCCGCTCG GTCCAATGGT GCGCCAGGGT
GATGATCAAT GGTTCGACAT TGTGCAGTGG ACGGTGTTTG CCACCTTCGC CGCCGAGGAG
TTCGGCATCA CGTCACGGAA TGTCGATCAG GCGAAGGAGA GCGATACGCG CCCCGAAGTG
CGGCGGTTGC TCGGCGCCGA TCCGAATGTG GACCTGGGCG CCAAACTGGG CTTGAGCAAG
GATTGGGCTG CGAATGTGAT CAAGTCGGTC GGCAACTATG CCGAAATCTA CGACCGCAAC
CTGGGACCGA ATACGAAGAC GGCGATTCCG CGCGGTATTA ATAACCTGTA CACGCAGGGC
GGGTTGCTCT ACGCGCCGCC GTTCCGGTAA
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| Protein sequence | MKRALGWLLV IPLLLAACGQ QAAQTGQPVE VTRIVEVTRV VEVTPAGGAA LVQPAATPAP
APAPAAPAGF GETLKAIQAR GKLICGVNSQ VPGFGFVDPT GAFSGFDIDY CKALAAAIFN
DVSKVEYRPL TAEQRFAALQ SGEIDVLIRN TTWTLTRDTD NGGNFVATTF YDGQGIMVPK
ASNITKLEDL NGATICVQKG TTTELNLADQ MAARKLQYTP AVFEDANSTF AAYAEERCDA
VTTDKSGLVS RRSVLPNPDD HVILDVTLSK EPLGPMVRQG DDQWFDIVQW TVFATFAAEE
FGITSRNVDQ AKESDTRPEV RRLLGADPNV DLGAKLGLSK DWAANVIKSV GNYAEIYDRN
LGPNTKTAIP RGINNLYTQG GLLYAPPFR
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