| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4004 |
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| Symbol | |
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| ID | 5210987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5008907 |
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| End bp | 5010097 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597593 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001278299 |
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| Protein GI | 148658094 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0588648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACC CTCCGCGTTC GACATCCCCA ATGCGGTTGA GTCGCGCTTT CTGGCGTGAT
GAGCGCGTCA TCCAGGTCGC TGCCCAGATC CTGTTTCTGG CGCTGGTTAT CTGGGTGGGA
TCGATTGCGC TGCGCAACAT GCTGACGTCG TTGCAGCAGC AGGGTTTGGT GCTGGGGTTC
GACTTTTTGA ACAGCGGCGC CGGGTTCGAT ATCAGTGATG CTCCAATCCC GTACAGCAGC
ACCGATACGT TCGCTCGCGC CCTTCAGGTC GGGTTACTCA ACACGATCCT GGTGAGTGTG
CTCGGCATCG TTCTGTCAAC GCTGCTCGGC ATTGTGGTTG GGGTGGCGCG TCTTTCGAGC
AACTGGCTCG TCAACCGCAT GGCGTGGGTG TTTGTCGAGG TGATGCGCAA TGTGCCGCTG
CTGGTGCTGC TCGTGTTCAT TTACACGGCA TTCTTTCTGA AACTTCCCCG CGCGCGGCAG
GCGGTGAGCC TCGGTCCGAT CTACCTGAGC AATCGTGGGG TGGCGATACC CTGGGGCGAG
CCGACCGACA CCTGGTCGCT CTATGTTTCG GTTCTGATCG GCGCCCTGAT CGCCGGTGCA
GTGGTGGGTC TGGCAATGCG CTGGTGGCAG AACCGGAGTG GTCGTCCGCG TCCGCAGGTT
GTGCCATCAC TGCTGACGAT GACGCTGATT GCGCTGATCG GATGGTTCGC CCTGCCGCAA
CCGCCGCTTG CGCTTTCACT GCCGGAGATC GCCGGCTTCA ACTTTCGCGG TGGTCAGGTG
CTCTCACCCG AATTTATGGC GCTCCTGATC GGTCTCGTTA TCTACACCGC AGCATTTATC
GGCGAAGTGG TGCGAGCCGG CATTCAGGCG GTGCCGAAAG GTCAGGTCGA AGCGGCGCGG
GCGCTGGGTC TCAACCCATC GCGCACGCTG CGGCTGGTCG TGTTTCCGCA GGCGTTGCGC
GTGATCATTC CGCCGGTCAC CAATCAGTAC CTGAACCTCA CCAAAAACTC GACGCTGGCG
GTCGCCATCG GATACCCTGA TCTGTTCGCA ATATCGGGAA CGATCATCAA TCAGACCGGG
CGCGCTGTTG AGATGATTGC AGTGGTCATG GCGGTGTATC TCATGCTGAG TCTGATCACG
TCGCTGGTGA TGAACTGGTA CAACCGTCGT GTACGTCTGG TGGAGCGTTG A
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| Protein sequence | MEHPPRSTSP MRLSRAFWRD ERVIQVAAQI LFLALVIWVG SIALRNMLTS LQQQGLVLGF
DFLNSGAGFD ISDAPIPYSS TDTFARALQV GLLNTILVSV LGIVLSTLLG IVVGVARLSS
NWLVNRMAWV FVEVMRNVPL LVLLVFIYTA FFLKLPRARQ AVSLGPIYLS NRGVAIPWGE
PTDTWSLYVS VLIGALIAGA VVGLAMRWWQ NRSGRPRPQV VPSLLTMTLI ALIGWFALPQ
PPLALSLPEI AGFNFRGGQV LSPEFMALLI GLVIYTAAFI GEVVRAGIQA VPKGQVEAAR
ALGLNPSRTL RLVVFPQALR VIIPPVTNQY LNLTKNSTLA VAIGYPDLFA ISGTIINQTG
RAVEMIAVVM AVYLMLSLIT SLVMNWYNRR VRLVER
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