| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4003 |
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| Symbol | |
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| ID | 5210986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5007692 |
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| End bp | 5008903 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597592 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001278298 |
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| Protein GI | 148658093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.431376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCA ATACGCCAAC AGTTTCTAAA ACGGCGGAGG CGCTGCCGCC GCCAACCGAA
CGCTCCAGCA TTGTTCGCTG GCTGCACAAG AACCTGTTCA GCACCTGGTA CAACGCGCTG
CTGACGGTGG TGATGCTGTT TCTGGCGGCG CTGATCGTGC GTGGCGTGCT GGAGTGGGCA
TTCACCCAGG CGCGCTGGGA GGTGATCACC GCCAACCTGC GCCTGTTTAT GGTCGGGCAG
TATCCGGTTG CGGCGCTCTG GCGCATCTGG GCATGTGTTG CGCTGCTGGC GCTGCTGATC
GGGATGTCGT GGAGTATCTG GGGCGGAGCG CAGCGCGGCG GGGCGATTGC GTTTGGGGCG
CTGCCGTTTA TCCTGGCAAT CATCACGTCC GACGAAACAG CGCGCCTGGC GCTGCTGATC
ACCGGGATTG CCGGTGTCGT CGGGTATGCG CTGAGCTGGC GATGGAGCGC CGCACTGCGA
CGGATCAGCA TCGTCGGCTG GATCCTCTAC TTTCCCATAC TCTTCGTGCT GGTCAGCGGG
GTCGGCGCCG ACGATAGCCC CATTCCACCG GTACCGACCA ATCTGTGGGG CGGATTGTTG
CTCACGCTGT TGCTCTCGGT AGTTGGCATC GTCTTCTCCT TTCCGCTTGG CGTCCTGCTG
GCACTGGGGC GGCAGTCGAG TCTGCCGGTG GTGCGATGGC TCTGCGTGGC GTACATCGAA
CTCATTCGCG GAGTGCCGTT CATCAGCGTC CTGTTCATGG CGCAGTTGAT GCTGCCACTC
TTTCTTCCCG GCATCACCAT CGACCGGGTC GTGCGCGCGA TGGCGGGCGT GGTCATTTTC
AGCGCCGCCT ATCTCGCCGA GAATGTGCGC GGCGGCTTGC AGTCGATCCC GCGCGGTCAG
TACGAAGCGG CGCGCGCGCT GGGGTTGAAC CCGTGGAAGA TGACACTGCT CATCATTCTG
CCACAGGCGC TCCGAGCGGT CATTCCCATC CTGGTCGGGC AGTTCATCGC GCTCTTTAAG
GATACCTCGC TGGTGGTGAT CGTTGGTCTG CTCGACCTCA TGGGCATTGC CAGAACTGTC
CTGGCACAGC CCGATTTCCT TGGATTGCAG GCGGAAGTGT ACACATTCGT CGCATTCATC
TATGGCATCT TCTGTTACCT GATGTCGGCG TTCAGTCAGC GCCTGGAAGC AAAACTGCAC
ACCGGACGCT GA
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| Protein sequence | MGANTPTVSK TAEALPPPTE RSSIVRWLHK NLFSTWYNAL LTVVMLFLAA LIVRGVLEWA
FTQARWEVIT ANLRLFMVGQ YPVAALWRIW ACVALLALLI GMSWSIWGGA QRGGAIAFGA
LPFILAIITS DETARLALLI TGIAGVVGYA LSWRWSAALR RISIVGWILY FPILFVLVSG
VGADDSPIPP VPTNLWGGLL LTLLLSVVGI VFSFPLGVLL ALGRQSSLPV VRWLCVAYIE
LIRGVPFISV LFMAQLMLPL FLPGITIDRV VRAMAGVVIF SAAYLAENVR GGLQSIPRGQ
YEAARALGLN PWKMTLLIIL PQALRAVIPI LVGQFIALFK DTSLVVIVGL LDLMGIARTV
LAQPDFLGLQ AEVYTFVAFI YGIFCYLMSA FSQRLEAKLH TGR
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