| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3986 |
|---|
| Symbol | |
|---|
| ID | 5210969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4987845 |
|---|
| End bp | 4988558 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640597577 |
|---|
| Product | FeoA family protein |
|---|
| Protein accession | YP_001278283 |
|---|
| Protein GI | 148658078 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1321] Mn-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.990793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTTT CAGAGCACAC CGAGTCCGTC CAGGACTACC TGAAAACCAT CTTTGACATC
CAGCGCGAGC AGGGGCGGGT TTCCACCACG GTGCTTGCCG AGCGTTTGAG GAATTCGCCG
GCTTCGGTCA CCGGTATGCT CAAAAAACTC GCTTCACTCA ACCTGATCGA CTACGAACCC
TACCAGGGAG CGGTGCTGAC GCCAGCCGGC GAGAAGATCG CGCTGGAAGT CATCCGCCAC
CACCGCCTGA TCGAGCGTTA CCTGGCGGAG GCGCTGGGTG TCCCGTGGGA CCGGGTGCAC
GATGAGGCGG AAAAGTGGGA ACATGTGTTG TCAGAAGACC TGGAGGACCG GATCGATGCA
GTGCTTGGCT ACCCGACGAC CGATCCGCAC GGGGCGCCGA TCCCGACGCG CGACGGCGCG
CTGCCGCCGC CACATGCCAC CCGCCTGAGC GATCTGCAAA CCGGCCAGTC GGCAACGGTT
GCCGAAGTGA GCGACCACGA CCCGGCGATG CTGCGCTATT TCGCCGAGTT GGGGCTGCGC
CCCGGTGTTG ATGTGACCGT CGTCGCCGTT GCACCCTTCG GCGGCCCGCT GACCGTGCGG
CTGGAAGATG TTGAGCATGC GCTGGGACGC GAGGTGGCGG GGTATATCGC CGTGTGTGAT
GTGACGCAGG CTGAGGCGGG GGAGGAAGCG GACAGGGCAG GTCGTGTGAC TTAA
|
|---|
| Protein sequence | MPLSEHTESV QDYLKTIFDI QREQGRVSTT VLAERLRNSP ASVTGMLKKL ASLNLIDYEP
YQGAVLTPAG EKIALEVIRH HRLIERYLAE ALGVPWDRVH DEAEKWEHVL SEDLEDRIDA
VLGYPTTDPH GAPIPTRDGA LPPPHATRLS DLQTGQSATV AEVSDHDPAM LRYFAELGLR
PGVDVTVVAV APFGGPLTVR LEDVEHALGR EVAGYIAVCD VTQAEAGEEA DRAGRVT
|
|---|
| |