| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3977 |
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| Symbol | |
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| ID | 5210960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4975178 |
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| End bp | 4975954 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597569 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001278275 |
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| Protein GI | 148658070 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.883947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGGG CAGTCATTTT CGATATGGGT GGAACACTGC TGCAATACCC GCGCCCTGGA
AACGGCGCCT GGCGCGAGTT CGAGGAACGC GGCATTCGCG GACTGTACCG CTACCTGGTA
GCGCAGGGAC ATCCAATCGC CGACGGAGAA GAAGCGTTCG TGGCGCGTAT GTTCGAGCGC
CTGGCGCAGG GATGGGAACA GGCGACCGGC GGACATATCA ACCTGCGCGC GGTTGACTGG
ATTGCGGCCG GAGCGGCCGA TCACGACCTG GATCTTCCGG AGAGCACACT GATCGAGGCA
GTCCACCACT ATGCCCGCCC CTTACGCGAT GGCGTCTCCG CTATGCCCGG GGCGGCAATG
GCGCTGGCGG AGTTGCGCGC GCGCGGCATT CATACCGGTC TGATCTCCAA CACCATCTGG
CCCGGCGACC TGCACCGCGA AGACCTGATG GCGCTGGGGC TGTGGTCATC CATCGAGTAC
GCCGTTTTTT CGGGCGACCT GGGCATCTGG AAGCCCCGCC CCCAGATTTT CCTCCATGTC
CTCGAACATT TCGGCGTCAG TCCGGCAGAA GCCATCTTCG TCGGCGATAG CCCCAAAGAA
GACATTCGCG GCGCACAACA GGCAGGTATG CGCGCCTTCT GGGTGCGCAG TCCCGAATTT
CCGCTCCCGC CAGACATTCA TCCTGATGCC ATTATCGAAA ACCCCGGCGA AATCGTGCCG
CTACTCGAAG CCTCTGGTCA ACTTCCGCCG CGCTCGAGCG TTTCTCGTAA AGGTTGA
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| Protein sequence | MIRAVIFDMG GTLLQYPRPG NGAWREFEER GIRGLYRYLV AQGHPIADGE EAFVARMFER
LAQGWEQATG GHINLRAVDW IAAGAADHDL DLPESTLIEA VHHYARPLRD GVSAMPGAAM
ALAELRARGI HTGLISNTIW PGDLHREDLM ALGLWSSIEY AVFSGDLGIW KPRPQIFLHV
LEHFGVSPAE AIFVGDSPKE DIRGAQQAGM RAFWVRSPEF PLPPDIHPDA IIENPGEIVP
LLEASGQLPP RSSVSRKG
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