| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3965 |
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| Symbol | |
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| ID | 5210949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4964052 |
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| End bp | 4965044 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597559 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001278265 |
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| Protein GI | 148658060 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.255718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0997602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT GGCTTGCATT CGTCGAATTC CTTCAGCAGG TGCTGCTGAC CTTCTATCGC
TGGACGGGCA GCGCCGGGTT TGCCATCATT CTGTTCACGA TTGTTGCGCG CATCGTCATT
CTGCCGCTGA CGATTAAGTC GCTCCAGTCG TCGCGCAAAA TGCAGGAACT GCAGCCGCAT
ATGAAGGAGC TGCAGCGCAA GTATGGCAAA GATCCCCAGA AACTCCAGGA AGAGACCATG
CGTCTCTACC GCGAGTATAA GGTCAACCCG GTCGGCGGGT GTTTGCCGAT GCTGCTGCAA
CTGCCTATCT TCCTGGGAGT TTATCAGGCA GTCATCAACC TGACGCGCGT CTCGCCCGCC
GAACATGCCG GCAGCGCCAT GCTGCGCGTG CTCAATGAGC AGGGGATTGC AGTGGGTGTC
GCCAGTGCAA CCCTCGGTCA ACCGCAACTG GCGGGCAGTT TCCTCTGGTT GCCCGACCTG
GGGAAGACCG ACCCGTACTA CATCCTGCCG ATCCTGTCGG TCATCTTTCA ACTCATTGTG
CAGTTGATGG CGACGCCGCG GGTGCAGGAT CCGCAACAGA AGGCGATGAT GCAGTCGATG
CTGATCCTGC CGATTGTGTT CGGGTATATT GGGTTCATCT TCCCAAGTGG CGCCGTGCTC
TACTGGGTGG TCGGCAGCAT CCTGTCGATC ATTCAGCAGT ACGTTATTTC TGGTTGGGGA
TCGCTCGCCA ATTATCTCAA GTTCCTGCCA ACCGACGGCG GTCTCTTTCC GCCTGTTCCG
CCGCCGTCGG TGCAGGCGGC AGCGTCCTCA ACCGGCAGTG GAAGCGCATC TGCGACAGAT
GAGCCAGCGC AAAAAGTCGA CTTTTGGGAA GTTCTCCGTC CGCTGACCGA GCCGCGCAGC
GGGGCAGGTG AGTCACCAGC GCAATCGACT GAAAGCGCTG CACCATCGGA GGTGCGACAG
GCGGCGCCGC GACGCCGGAG AGTGCGCAAA TAG
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| Protein sequence | MPIWLAFVEF LQQVLLTFYR WTGSAGFAII LFTIVARIVI LPLTIKSLQS SRKMQELQPH
MKELQRKYGK DPQKLQEETM RLYREYKVNP VGGCLPMLLQ LPIFLGVYQA VINLTRVSPA
EHAGSAMLRV LNEQGIAVGV ASATLGQPQL AGSFLWLPDL GKTDPYYILP ILSVIFQLIV
QLMATPRVQD PQQKAMMQSM LILPIVFGYI GFIFPSGAVL YWVVGSILSI IQQYVISGWG
SLANYLKFLP TDGGLFPPVP PPSVQAAASS TGSGSASATD EPAQKVDFWE VLRPLTEPRS
GAGESPAQST ESAAPSEVRQ AAPRRRRVRK
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