Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3955 |
Symbol | |
ID | 5210939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4952053 |
End bp | 4953270 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597549 |
Product | hypothetical protein |
Protein accession | YP_001278255 |
Protein GI | 148658050 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.841682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTTC CCTCTGATCA GTATCCGAAA CTGCGCGCCA TCGATATTCG CCAGGTGATG CACGACGGTC AACCGTCGCT GTTGCTGCGC GATCCGCTCC AGATTTCGGA TCGCTTCCTG GTGATCTCAC ACGGTCTCGG TCCGGCGCTG TTGTTCTGCG ATGGAAAGCA CAACCGTGCG GCGATTGCCG GTAAGTTGCG CTCTGTCTTT GGTCTGCCGG TCGATGTGTC GCTGGTGAAC AATCTGGTCG ATGCGCTCGA CGAGGCGTTG CTGTTGGATA ACCTGCGCTT CAAGACGGCG CAGGCGCGCG CGCTGGCTGC CTATCGCGCC GCGCCGTTTC GCCAACCGGC GCTCGCCGGA CAGTCGTACC CCGCCAATCC GGCGGACCTC CGGCGCCTGC TCGATGGCTA TGTCGCTGCG GTTGGTCAGG TGACGCCAGC GCCGCCGACC GGTCGCGGCG TGCTCAGTCC GCACATCGAC TATGAACGTG GCGGGCGGGT GTATGCGCAG GTCTGGCAGC GGGCAGCAGA GATGGTGCGC GCCGCCGAGA TTGTGATCCT GATCGGCACG GATCACTACA GCCCTGAACC GATCACGCTC ACACGCCAGC GCTATGCAAC TCCGTTTGGT GTGTTGCCGA CCGATGCTGC AATCGTTGAC GCGCTGGCGC ATGCGCTCGG TGAAGAGGCA GCGTTTGCGG GCGAGTTATA CCATCGTGTC GAACATTCGC TCGAACTGGC GGCGGTATGG TTGCAGTATG TGCGCGGCAA TCCGCCCTGC CCGGTCATTC CCATTCTTGT CGGTTCCTTC GCGCGCTACA TCGGCGGCGA AGACCCGGCG ACCGATCGGC GTCTCGAAGC GTTGATGACA GCACTGCGAC AGGTTATGGA TACACGCCGC ACGCTGGTGG TGATCTCCGG CGATATGTCG CACGTCGGTC CGGCATTCGG CGGCGCGCCG CTGAGCGAGT CCGATAAAGC GGCGCTCCGT CGCTCGGATG AACAGGTGAT CGACCGCATG CGCGCCGGTG ATGCCGCCGG TTTCTTCCGG GTCATCGCCG ATACGGGCGA TCGTCAGAAT ATCTGCGGGT TGCCGCCGAC CTATGTGGCG CTTCGGTTGA TGGGCGCGGT CGAAGGTGAA CTGGCGGGCT ATGCGCAGTG CCCGGCTGAT GACGAGGGAA CATCAGTTGT GTCGATCTGC GGGATGGTGT TTGGGTGA
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Protein sequence | MLLPSDQYPK LRAIDIRQVM HDGQPSLLLR DPLQISDRFL VISHGLGPAL LFCDGKHNRA AIAGKLRSVF GLPVDVSLVN NLVDALDEAL LLDNLRFKTA QARALAAYRA APFRQPALAG QSYPANPADL RRLLDGYVAA VGQVTPAPPT GRGVLSPHID YERGGRVYAQ VWQRAAEMVR AAEIVILIGT DHYSPEPITL TRQRYATPFG VLPTDAAIVD ALAHALGEEA AFAGELYHRV EHSLELAAVW LQYVRGNPPC PVIPILVGSF ARYIGGEDPA TDRRLEALMT ALRQVMDTRR TLVVISGDMS HVGPAFGGAP LSESDKAALR RSDEQVIDRM RAGDAAGFFR VIADTGDRQN ICGLPPTYVA LRLMGAVEGE LAGYAQCPAD DEGTSVVSIC GMVFG
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