| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3954 |
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| Symbol | |
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| ID | 5210938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4950876 |
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| End bp | 4952069 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597548 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001278254 |
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| Protein GI | 148658049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC TTGCAATCAA CGGAGGCGCA CCGGTGCGCA CCCGTCCCTG GCCCCGCTGG
CCGCAGTGGG ATGCGCGGGA AGAGCAGCGA GTGCTCGATG TGCTCCGCAG CGACGATTGG
GGCGGGTTCG CGCCGGTGGT TGAGGAGTTC GAGCGCGCGT TCGCGCAGCA CCACGGCGCC
ACCTTCGGCA TTGCGGCTGT CAACGGTACG CAGACCCTCG TAGCGGCGCT CATGGCGGTC
GGCATCGGTC GCGGCGATGA GGTGATCGTG CCGCCGTACA CCTTCATCGC CACAGCATCA
GCGGTGCGTC TGGTCGGCGC AACGCCGGTC TTTGCCGATA TCGAGGCGGA TACCTACAAT
CTCGATCCGG CTGCGGCGGA AGCTGCAATA ACCTCGCGCA CACGGGCGAT CATTCCGGTC
CACTTCGCCG GTCAGGCGGC GGATATGGAT CGCCTGACGG CGCTGGCGCA GCGTCACGGT
CTGATCCTGA TCGAGGATGC CGCCCACGCG CACGGCGCAT CCTGGCGCGG TCGGATGTGC
GGATCGCTTG GCGATGTCGG TTCGTTCAGT TTCCAGAGCA GCAAGAATAT GACCGCTGGC
GAGGGTGGGG CGCTGACAAC GAACAACCGG GCGCTCGCCG ATGCCATCCG CAGCCGGGTC
AACCAGGGGC GCGCGATTGG CGGCGCCTGG TATGAGCACC CGAATCTGGG CACGAATATG
CGTCTGTCTG CCTGGCAGGC GGCTGTGCTC CTGGCGCAAC TGGAGCGTCT CGATGAACAG
ACCGACCGGC GCATGGCATG TGCGCGCCGT CTGAATGCGT TCTTCGCCGA AGTTGAGGGC
ATTCAGCCGA TGCGCTGGGA CGAACGCGCG GACCGGCACG CCTTTCATCT GTACATGGTG
CGCTACGATG AACATGCCTT TGGCGTGCCG CGCGATCTGT TCGAACAGGC GCTGGAAGCC
GAGGGTATTC CGTGTTCGAC GGGGTATCCC TTTCCGCTCT ACCGGCAACA ATCGCTGGGA
GCGGAGTTTG CGCGCGCCAC TCATTGCCCG AATGCCGAAC AGGCGTGTCG TGAGGCGATC
TGGCTGCCGC AGTGGCTGCT GCTTGCCGAT CCGCACGAGA TGGAAGATGT CGTCGCTGCG
GTGATCAAAA TCCGCGATCA TCGGGATGAA CTGCACTATG CTGCTTCCCT CTGA
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| Protein sequence | MAKLAINGGA PVRTRPWPRW PQWDAREEQR VLDVLRSDDW GGFAPVVEEF ERAFAQHHGA
TFGIAAVNGT QTLVAALMAV GIGRGDEVIV PPYTFIATAS AVRLVGATPV FADIEADTYN
LDPAAAEAAI TSRTRAIIPV HFAGQAADMD RLTALAQRHG LILIEDAAHA HGASWRGRMC
GSLGDVGSFS FQSSKNMTAG EGGALTTNNR ALADAIRSRV NQGRAIGGAW YEHPNLGTNM
RLSAWQAAVL LAQLERLDEQ TDRRMACARR LNAFFAEVEG IQPMRWDERA DRHAFHLYMV
RYDEHAFGVP RDLFEQALEA EGIPCSTGYP FPLYRQQSLG AEFARATHCP NAEQACREAI
WLPQWLLLAD PHEMEDVVAA VIKIRDHRDE LHYAASL
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