| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3952 |
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| Symbol | |
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| ID | 5210936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4948381 |
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| End bp | 4949622 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597546 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001278252 |
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| Protein GI | 148658047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CATCGTTGCA GCGCAGCACA TTTGCCGCAA GGACGTTCGC GGCGTTACGC
TACCGTAACT ATCGTCTCTG GTTCTTTGGT CAGATGGTGT CGCTCTTCGG CTCCTGGATG
CAGACCACTG CCCAGGGATT CCTGGTGTTC CAGTTGACCG GTTCGCCGGC GTACCTGGGA
TACGTCGGCT TTGCTGCTGG CGTGCCCGCC TGGGCGTTGA CCCTGTATGG CGGCGTGGTT
GCCGACCGTG TGCCGCGGCG GACGCTCCTG ATTGTGACGC AGATAGCGCA GATGGCGCTG
GCGTTCATTC TGGCAGGGCT GGTCTTCAGC GGCATTGTTC AACCCTGGCA CATTATCGTT
CTGTCGCTGT TGCTGGGGGT CGCCAACGCC TTCGACGCCC CGGCGCGCCT GGCGTTCGTG
CGCGAACTGG TCGATAAGGA GGATCTGACG AACGGTATTG CACTCAATGC GACAATGTTC
AACCTGGCGA CCACGACCGG ACCGGCAATG GCGGGCGTCA TGTACAACCT GGTCGGACCG
GCGTGGTGTT TCATGCTCAA CGGTATCTCG TTTCTGGCGG TCATCGGCGC ACTCTGGCGG
ATGCGAATCG CGTCTGGTCC GGTTGCGCCG CGCAATGCCT CCGCGTGGCG CGATCTCCGG
GAGGGTCTGA GTTACATCCT GCACGAGCCG GTGGTGCGGA CGCTGATCGT GCTGGTTGGG
GCGACGAGTT GCTTCGGTAT TTCGTTTGCG ACCCTCTTCC CGGCGTGGGC GGTGCGCATT
TTAGGCGGCG ACGCAACAAC GACCGGGCTG TTGCAATCGG CGCGCGGTCT GGGCGCGCTG
ATGGGCGCGT TGCTGATTGC ATCGCTTGGT CGCTTTCAGT TCAAAGGGCG CCTGCTCACG
GTCGGCACGT TCGCCTTTCC ACTCCTGCTG ATCCTGATGA CCTTCACCAA CCGGTTGTGG
CTGACTCTGG CGATCCTGGT CGCTTCCGGT CTGGCGGTCA TCCTGATCAT GAATCTGGCG
AATGCGCTGG TGCAGACGTT GACCCCTGAT GCGTTGCGCG GTCGGGTGAT GGCGGTGTAC
AGCATGGTTT TCTTCGGCAT GATGCCGGTA GGGGCGTTGT GGGTCGGGGT GGTTGCCGAG
CGGGTGGGAG AACCGGCGGC AGTGATCAGT GGGGCGCTGG CGGTGCTGGG TGTCGCAGGA
GCGATTTTTG TCGCCGTGCC GCAAATTCGG GCGTTGCGGT GA
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| Protein sequence | MTIPSLQRST FAARTFAALR YRNYRLWFFG QMVSLFGSWM QTTAQGFLVF QLTGSPAYLG
YVGFAAGVPA WALTLYGGVV ADRVPRRTLL IVTQIAQMAL AFILAGLVFS GIVQPWHIIV
LSLLLGVANA FDAPARLAFV RELVDKEDLT NGIALNATMF NLATTTGPAM AGVMYNLVGP
AWCFMLNGIS FLAVIGALWR MRIASGPVAP RNASAWRDLR EGLSYILHEP VVRTLIVLVG
ATSCFGISFA TLFPAWAVRI LGGDATTTGL LQSARGLGAL MGALLIASLG RFQFKGRLLT
VGTFAFPLLL ILMTFTNRLW LTLAILVASG LAVILIMNLA NALVQTLTPD ALRGRVMAVY
SMVFFGMMPV GALWVGVVAE RVGEPAAVIS GALAVLGVAG AIFVAVPQIR ALR
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