Gene RoseRS_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3942 
Symbol 
ID5210926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4933992 
End bp4935002 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content66% 
IMG OID640597538 
ProductATPase, BadF/BadG/BcrA/BcrD type 
Protein accessionYP_001278244 
Protein GI148658039 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACG GGTACGTTCT GGGCATTGAT GCTGGCGGTT CCAAAACCCA CGCACTGATT 
GCCGATCTGG AAGGGCGTGT CGTCGGTTGG GGGCAGAGCG GACCCGGCAA CTGGGAGGGT
GTGGGTCTCG ACGGCGCTGC AGCGGCGTAT GCACAGGCAG TCGATGCGGC GCTGGAGGTG
GCGGGCATTT CCCGCGATGC GCTGATCGCT GCCGGATATG CGCTGGCAGG TCTCGACTGG
GAGAGTGATC ATGATCGTCT CACGCCGGTG GTGACGCGCC TGGGCGTACC CGGTCCGTTC
ATCCTGGTGA ATGATGCGTT TGGCGCCCTG CGCGCCGGTT CTGCCGATGG ATGCGGCGTT
GTCGTCATCG TGGGCACGGG TTCGACCGTC GCCGGACGAA ATCGTCGCGG CGATACCTTT
CGCACCTTCG GTTTGGGAAT GGTGTGGGGC GACTTTCACG GCGCCACCGG GCTGGTGTGG
GAAGCAACCC GCGCCATCGG GCACGCCTGG ATCGGACGCG GACCGGCGAC GGCGCTGACC
GATGCTTTTG TCCAGGCGTA TGGCGCTGCC GGTCTGCTCG ATCTGGTTGA ACGGGTCTCG
CGCGGCGCGG CGCCGCACCC CGATGGACGA CTCGCGCCGC TGATCTTCGC AACCGCAGAT
GCAGGGGACG AGGTTGCCTG TCGGATCGTT CGTCAGGCGG GTGAGGACCT GGGACAGACG
GCGGCAGCGG TCGTGCGTAA ACTCGGTCTC GGCGCTGAAC CATTCGACCT GGTGCTCGCC
GGCGGCGTCT TTCGTTCGCG GAATACGCTC CTGATCGAAA CGCTTGCCAG CCAGGTGCGC
CTGGAGTCTC CGGCGGTACG TGTTGTGCTG CTCGAAGCGC CGCCTGTGGC GGGAAGCGTC
CTGCTGGCGT TCGATGCTGC CGGTCTGCCA ACGCCGCCTG CGCTCCGTGA GCGGTTGCTG
GCGGAAGCGC ATCACCGGTT CGATATGCTT CAGAGAGGAA TACCGCAATG A
 
Protein sequence
MRHGYVLGID AGGSKTHALI ADLEGRVVGW GQSGPGNWEG VGLDGAAAAY AQAVDAALEV 
AGISRDALIA AGYALAGLDW ESDHDRLTPV VTRLGVPGPF ILVNDAFGAL RAGSADGCGV
VVIVGTGSTV AGRNRRGDTF RTFGLGMVWG DFHGATGLVW EATRAIGHAW IGRGPATALT
DAFVQAYGAA GLLDLVERVS RGAAPHPDGR LAPLIFATAD AGDEVACRIV RQAGEDLGQT
AAAVVRKLGL GAEPFDLVLA GGVFRSRNTL LIETLASQVR LESPAVRVVL LEAPPVAGSV
LLAFDAAGLP TPPALRERLL AEAHHRFDML QRGIPQ