| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3939 |
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| Symbol | |
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| ID | 5210923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4929902 |
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| End bp | 4932076 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597535 |
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| Product | Amylo-alpha-1,6-glucosidase |
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| Protein accession | YP_001278241 |
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| Protein GI | 148658036 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATACC TTGTCGTTTC GGACAATCAC ACGTTCATCA TCAGCCGTCA CGATGGCGAT
ATTCCTGTCG AGGATACGCC GTTGGGTCTC TATTTCTACG ATACGCGCCA TCTCAGCGCG
CTCCAGGTGC GCCTCGACGG TCAACCGCTC GAGTTGCTAT CCTGGAACGA TGAGCATGTC
TATCACGCGG TCTGTTTGCT GACGAACGGC GCACTGCGAA GCGCAGAAGG CGGCATTGAC
CGTCAGACGA TAGCGGTGCG ACGCGAGCGG GTGGTGCGCG ATGCGGTGTT CGAGCGGCTC
ACGCTCACCA ACTACAACCG CACGCCGGTT GCGTTTGATC TGACTATCGA GATGGCGGTC
GATTTCGCCG ACATCTTCCT GGTGCGCGGC TTTGCCGGCG GTCCTCGCGG AACGATTGAA
CCGGTCGATT ATCAGGGTGA TCGGTTAAGG TTCGTCTATC GCGGCGCCGA TGAGGTTGTG
CGCGTCACTG ATATTGACCT GAGCGCGATC CCCGATACGG TGGACATCCT CGGTGCTGAG
GCGCCGCCGC CTTCGCGTGG TCCGCAGGGT GAAGGATCGC GGCGTCTGCG TCAGTTGCCG
ACGCCGGCGC GCGCACAGGT GCACTGGCGG GTCGAACTGG CGCCCCACGC CACGTGGAGC
GTGACACTGA CGATGACGCC TTCGATCCAC GCAACCGGAC ATCCGGGAAG TGAACGTGAT
CTGACATTTG AGCAGGCGCT GGACGAGGTG CGTGCTTCGT ACCAGGCGTG GGACGATGCC
ACGGCGATGG TGATGACCGA TCATCCGACG CTCAACCGGT TGTTGCGGCG CAGCAGTTAT
GACCTCCGTG CGCTGACCGC CCGTTTTGGC GATGTTCTCC TGCCGGTTGC CGGCATTCCC
TGGTTTGCCG TGCCCTTTGG ACGCGACTCG CTGATTACCA GTCTCCAGAC ACTCTGGTTT
CACCCTGATC TTGCGCGGGG AACGTTGCGT TACCTGGCAG AGCATCAGGG GACACAGGAT
AACCCCTGGC GCGATGAGCA ACCTGGCAAG ATTCTCCACG AGATGCGCTT CGGTGAGCTT
GCCAATACCA ATAGTGCGCC GTTCAATCCG TACTACGGCA GTATCGATTC GACACTGCTC
TTTTTGATGC TCTTCGCCAC GACCGTGCGC TGGACCGGCG ATCAAGCGCT GTACCATGAT
CTGCTGCCGG CTGCGCTGCT TGCACTCGAC TGGATGGACC TCTATGCCGA TGCGGATGGG
GATGGATACA TCGCATTCGA GCCACGCTCA TCAGCCGGGT TGCGCATCCA GGGGTGGAAG
GACTCGCGCG ACTCGGTGGT GCACCCGGAT GGGACGCTCG CAACGCCGCC GCTGGCGCTG
GTGGAGGTGC AGGCATATGC GTATGCTGCC AGAACGTGGA TGGCCGATCT GCTGGAACTG
ATGGGAGATC ACAATCGCGC GGCGGAGGTG CGCGCCGGCG CCGCCACCCT GAAAGAGCGC
TTCAACGTCG ATTTCTGGCT GGCTGAAGAA GGCTTCTATG CCCAGGCAAT CGAGGTCGGC
AAGGGTCCTG TCCGCGAGGT GACCAGCAAT CCGGGTCATG CGTTGCTGTG CGGCATTCTG
ACGCCGGAAC GCGCCGCGCA GGTTGCAGCG CGCCTGGTTG CGCCCGATAT GCTGTCGAGT
TGGGGGGTGC GCACGCGCAG TGCGGCAGAC CCGAATTACA ATCCGATGAG TTATCACAAC
GGCAGTGTCT GGCCCCACGA CAATTCCCTG ATCCTGTGGG GTCTGGCGCG CAGCGGGTTC
CGTGACCAGG CGAACGAGAT TGCCGGTCGT CTGCTTGAGG CTGCATCCCA TGTTCATCTG
TGCCGCCTGC CTGAGTTGAT GTGCGGGTAT GACCGCGAGC CAGGCATGTT CGATAGCCCT
GTTCCATATC CGGTCAGTTG CCGTCCCCAG GCGTGGGCTG CTGGCACAGG CTTGCTGATT
GTGCAGAGCA TATTGGGGCT GGAGGTCGAT GCGTTCGCAA ATACGCTGCG GCTTGCGCCG
CACCTGCCCC CCTGGCTCTC GATGGTCGAG GTGCGGAACC TGCGGGTCGG CGAGCGGCGG
GTGGATTTCC GCGCGACCCG CGCCGGGGTG GAGGTCATTT CGGATGGCGG GGTCAATGTG
CAGGTCGAGC AGTGA
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| Protein sequence | MEYLVVSDNH TFIISRHDGD IPVEDTPLGL YFYDTRHLSA LQVRLDGQPL ELLSWNDEHV
YHAVCLLTNG ALRSAEGGID RQTIAVRRER VVRDAVFERL TLTNYNRTPV AFDLTIEMAV
DFADIFLVRG FAGGPRGTIE PVDYQGDRLR FVYRGADEVV RVTDIDLSAI PDTVDILGAE
APPPSRGPQG EGSRRLRQLP TPARAQVHWR VELAPHATWS VTLTMTPSIH ATGHPGSERD
LTFEQALDEV RASYQAWDDA TAMVMTDHPT LNRLLRRSSY DLRALTARFG DVLLPVAGIP
WFAVPFGRDS LITSLQTLWF HPDLARGTLR YLAEHQGTQD NPWRDEQPGK ILHEMRFGEL
ANTNSAPFNP YYGSIDSTLL FLMLFATTVR WTGDQALYHD LLPAALLALD WMDLYADADG
DGYIAFEPRS SAGLRIQGWK DSRDSVVHPD GTLATPPLAL VEVQAYAYAA RTWMADLLEL
MGDHNRAAEV RAGAATLKER FNVDFWLAEE GFYAQAIEVG KGPVREVTSN PGHALLCGIL
TPERAAQVAA RLVAPDMLSS WGVRTRSAAD PNYNPMSYHN GSVWPHDNSL ILWGLARSGF
RDQANEIAGR LLEAASHVHL CRLPELMCGY DREPGMFDSP VPYPVSCRPQ AWAAGTGLLI
VQSILGLEVD AFANTLRLAP HLPPWLSMVE VRNLRVGERR VDFRATRAGV EVISDGGVNV
QVEQ
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