| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3934 |
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| Symbol | |
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| ID | 5210917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4921079 |
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| End bp | 4921945 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640597530 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001278237 |
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| Protein GI | 148658032 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.916844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGG TGACCTACCG CGATAGCGAG AGCGTTCACC TGGGTGCATT ACGCGGCGAC
GAGGTCGTGT CGCTTGCCGA TGTAGCGCCC GATATGCTGA GTCTGATCGA TGCCGGTCCT
GCCGGGTTGG AAGCTGCGCG CGCAGCAGTG GAACGCGGTG CAGGCGTACC GCTGAGCGCT
GTCACCCTCC TTGCCCCCAT CCCGCGTCCG CGGCAGAATG TCATCTGTCT GGGCATGAAC
TACGTCGCGC ACACCATCGA GTCGTACCGC GCACGCGGGC GAGAGCCGAA AATGCCGGAG
TACCCGGTTT TCTTCACCAA AGCGGCGCAC ACCGTGTGTG GACCAGACGA CGATATTCCG
CTCGATCCGA AAGTGACAAA CGAACTGGAT TACGAAGTCG AACTGGCATT CATCATCGGT
AAAGCCGGGA TGAACGTCCC GCGCGATGAG GCAATGGAGT ACGTCTTCGG ATACACGATC
GTCAACGACA TTTCGGCGCG TGATCTGCAA AGCCGGCATC AGCAGTTCTT CAAAGGCAAG
AGTCTCTATC GCGCCTGCCC GATGGGACCG TGCATCGTGA CGACCGATGA GATCCCTAAC
CCTGCCGGAC TCGGCATACG ACTGCGGTTG AACGGAGAGA CACGCCAGGA CTCGCACACC
GGAGACCTGA TTTTCGATAT TCCGGCGATC ATCGAGCATC TGTCACTCGG TATGCCGCTG
GAACCGGGCA TGATCGTTGC AACCGGCACC CCCGCCGGTG TCGGACTCGG TCGCACACCG
CCGGAGTACA TGCGCCCTGG CGATGTGATG GAAGCAGAGA TCGATTCGAT CGGCATCCTG
CGCAATCGGA TTGTTGGCGT CGCATAG
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| Protein sequence | MRLVTYRDSE SVHLGALRGD EVVSLADVAP DMLSLIDAGP AGLEAARAAV ERGAGVPLSA
VTLLAPIPRP RQNVICLGMN YVAHTIESYR ARGREPKMPE YPVFFTKAAH TVCGPDDDIP
LDPKVTNELD YEVELAFIIG KAGMNVPRDE AMEYVFGYTI VNDISARDLQ SRHQQFFKGK
SLYRACPMGP CIVTTDEIPN PAGLGIRLRL NGETRQDSHT GDLIFDIPAI IEHLSLGMPL
EPGMIVATGT PAGVGLGRTP PEYMRPGDVM EAEIDSIGIL RNRIVGVA
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