Gene RoseRS_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3932 
Symbol 
ID5210915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4919860 
End bp4920150 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content57% 
IMG OID640597528 
Productphage shock protein C, PspC 
Protein accessionYP_001278235 
Protein GI148658030 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.923929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC GACCACTTCG ACGCATACGC AGTGAGCGCA TTTTCGGCGG CGTCGCCGCC 
GGTGTGGCGC GCGCGATGAA CATCGATCCG GTGTTTGTAC GTCTGGGTTT TCTGTTTCTC
GCACTGCTGA ACGGGTTTGG CACGCTATTG TACCTGGCAA TGTGGATCCT TGTGCCAGCC
GAGGATAGTC AGGAGATCGA CCCCAGAGCG CAGATCCGTG AAAATATCGC CGATATACGC
GCGGTCATTG AGGAATATGT GGCGCGGGTG CGGAGCATGT TCGCGGCGTA A
 
Protein sequence
METRPLRRIR SERIFGGVAA GVARAMNIDP VFVRLGFLFL ALLNGFGTLL YLAMWILVPA 
EDSQEIDPRA QIRENIADIR AVIEEYVARV RSMFAA