Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3926 |
Symbol | |
ID | 5210909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4913223 |
End bp | 4914551 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597522 |
Product | aminotransferase class-III |
Protein accession | YP_001278229 |
Protein GI | 148658024 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA TACCTGCAAT GGCGCTACTC GAACAGACAG CGTATCTGTC ACCTGTCTGG GCGCGCTACA GCGATATACT CGTTGAGCGC GGCGAAGGGG TCTATCTGTA CGATGTCGAA GGGCGACGAT ACCTGGATTT CACCTGCGGC ATCGGTGTAA CGAACACCGG GCACTGCCAT CCGCGCGTGG TGCAGGCGAT CCGCGACCAG GCTGGTCTGC TGCTGCATGG GCAGGCAAAC ATCGTCTATC ACCGCCCGAT GCTCGAACTG GTCGCCGAAC TGCGCACCAT CGTTCCTTCA GAACTCGACA GTTTCTTTTT CAGCAACAGC GGCGCAGAGG CGGTCGAGGG CGCGGTCAAA CTGGCGCGTC AGGCGACGGG ACGCAGCGAC ATCATCGCGT TCGATGGCGG CTTCCACGGG CGCACCGCAG GCGCGATGGC GCTCACCAGC AGCAAGGGAA AATATCGCCA TCGGGTCGCA CCATTGCCTG CAGGGGTGCA TTTCGCGCCG TATGCTGCAT GCTACCGCTG CGCCATTGCC CGCGCAGCCG GCGCCGACAC GGCAGCGATC TCCGGCGCAG CGCCCGACGA CCTGGGGTGC TGCGGCAATC CGCTGCATCA GATCGAACAC CTGCTGCATA CCCAAACGAC ACCGGAGGAC GTGGCAGCAA TCCTGGTGGA ACCGGTGCTC GGCGAGGGCG GCTATATCGT TCCGCCGGTC TCATTTCTTC AGGGGTTGCG GCGCATCTGC GACCGCTACG GAATACTCCT GATCGTGGAC GAAGTGCAGA GCGGATTTGG GCGCACCGGT CGTTTCTTCG CTATCGAACA CTTCGGTATC GTTCCCGACA TAATGACGGT TGCCAAAGGG ATTGCATCAG GACTTCCGCT TTCTGGTATT ATTGCACGGC GCGCCATCAT GGAACGCTGG CAGCCAGGAT CGCATGGCGG CACCTACGGC GGCAATGCAG TCGCGTGTGC TGCTGCGGTC GCCACGATTC GGGCGATGCG TGAAGAGCGC ATGGTCGAAA ACGCATCGCG TCAGGGCGTG CTGTTGAAAA CAGAACTGTT GCGGATCAAG GCGCAGTCTC CATCGATTGG CGATGTACGC GGAATAGGGT TGATGGTTGG CGTCGAACTG ACGGCGGCGG ATGGCACACC CGATACTGCG CTGGCGAAAC GCACTGTGGC GGCATGCCGC GATCGGGGGT TGCTCCTGTT GACCTGCGGA CCATACGACA ACGTCATCCG TTTCATTCCG CCGTTAATCG TCGAGGAACA TCAGATTCGC GACGCCGTGC GCATCTTCGA GGAAGCGCTG GCGTCTTAG
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Protein sequence | MTTIPAMALL EQTAYLSPVW ARYSDILVER GEGVYLYDVE GRRYLDFTCG IGVTNTGHCH PRVVQAIRDQ AGLLLHGQAN IVYHRPMLEL VAELRTIVPS ELDSFFFSNS GAEAVEGAVK LARQATGRSD IIAFDGGFHG RTAGAMALTS SKGKYRHRVA PLPAGVHFAP YAACYRCAIA RAAGADTAAI SGAAPDDLGC CGNPLHQIEH LLHTQTTPED VAAILVEPVL GEGGYIVPPV SFLQGLRRIC DRYGILLIVD EVQSGFGRTG RFFAIEHFGI VPDIMTVAKG IASGLPLSGI IARRAIMERW QPGSHGGTYG GNAVACAAAV ATIRAMREER MVENASRQGV LLKTELLRIK AQSPSIGDVR GIGLMVGVEL TAADGTPDTA LAKRTVAACR DRGLLLLTCG PYDNVIRFIP PLIVEEHQIR DAVRIFEEAL AS
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