| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3925 |
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| Symbol | |
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| ID | 5210908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4909665 |
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| End bp | 4913207 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597521 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001278228 |
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| Protein GI | 148658023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCG CAGTCATCAG TCTGGCGCTC CTCGCCGCCA TTGGTGCGGC GGTTCTCCTG
ATCGCACCGG TGCGCGCGCG GTTGCAATTC TGGTTGCGGC AGTTCTGGGC GTCTGTTCGA
AGACGTGCCA GGCTGGCGCG CAGTGCAACG GTTATCAGCA GTTCCGGCGA GGAGATTGAA
CTACCTGATG CTGTGCTTGC CGATATGCCC TGGACTGGAC GAATACGCGA GTCGTTGTTC
GATACACGCC TTCGTGTCGT TGGCGCCGGT ATCCTTCTGG TGGTGTCGAT TCTGCTGGTA
CTGCCTCGTC TGCTCCCCGA AACCCGCGCT GATGAACTGA CGGTGCTGGT GGCGCCGTTC
CATGAAACCG GCGGCGTTTC GGGCGCAACA GGACGCAGGG CGGCGGTTGA ACTGGCGGAT
CTGCTGGCGA CGACTTCTGG TCCGGGCGTT ACGGTTCGAT CAGTTGACGT TGCACCCGAC
GATCTTGCCG CAGCGCAGGC GCTCCTACAA ACATACCGTG CCGATCTCCT CGTTTGGGGA
GAGATAACCA CCGGCGGGAT GATCGATGCC CCAACGCTGA CCCCTATCGT CATCTATGCG
CCGGAAGGGA TACAGGCGTC GTACAGTCTC GACGGTTTTG TCGGGCGCTT CGCATTTCCA
TCGGTCTATC CGCTTGCGAC GCAACCGATC AATGGGCGTG TCGTCATTCC GCGACTGGTG
CGCGCGCTGG CGGATTACAA ACGCGGAGCG TACAGCAACG CCATCGCCAC GTTCGACGAA
CTCGAGCGCG ATTACCCGGC GTTGCGCCCC GGATTGCTGC GGACACTGCG CGCTGTGATC
TGGTGGGCGC GCGGTGACTA TGAGCAGTCG GTCGGGGAGT TCCAGCGGGC AATCGCTGCC
ATGCCCGATG CGTCGCCTGC CGAACTGGCA CGATTGTACG CCTCGCTCGG CGCAGTTCAG
TACGACATGG GCGACCCGGC TTCCCGTGAG TCGTTCAATC GGGCGATTGC GCTGCTGCAA
GACCAGGATC TCGGCGTACT GCGGTACAGT CTGGCGCTGG AGGAACTGCG GGCTGGCGAT
CCGGCGGATG CGGCTGTGTC GCTCGAACAG GCGCGCCGGT TATTGCCGCC ATCCACGCCG
CTGTTGGTGA CGCTTGCCAG AGCATACCGT CTCGATGGGC AACTGGAAGC AGCGGCAGAG
ATACTCAACG CCGCTGCCCG CCAGATCGAC GCCGATGATC GCAATGTTCC CTCCGATCTT
CGTCCGCTTG TGAGTGCACG CCTGCGCGCG TCAGTCCAGG GTGAGCGTGC GCTTTTGCGT
CTGGCGCAAC TGGTCGATGC GCGCGGTCCG CTCCTGTGGG AACTCGATGT CACCCCTCCG
CCCTGGACGC AAGATAAAAC AACGCCGTCC CCAGAGACAG AACTGGAAGC TATTCTCGGC
GACCTTTCGC TGGCGCTGCG TGAAGCGACA ACGCTCAACC AGGAGTGGAA TAAACGTGCC
GCAACCGCCG ATACCGAACA ACGGCGGGTC GATAGCAGCA TCGCCATCCA TCAGGCGCGC
CGCGCCGATC TCGTGCTGCG GCAGCATCGT TTCTGGCTGG CTGCGGTCGA AGTCGAACTC
GCGCGGTTGC GCGATACGCG ACCACCGACG GGCGTTGCGG CAATCTGGGC AGGTCTGACG
CGCACCTGGT CGCCGGCTAC CGATGCGCTT CGACAGATCG ACATCCTTGA AAAGACACAG
CCAGGCAGCG CCGAACTGAC CCTTCTGCGC GGAAAATCAC TGGTGGTGAA TGATCGTTTG
GATGAAGCGC GCACAGCGTT CGAGACGGCG GCGCGACTGG CGCCCGACCG ACCGGAGCCG
CTGTTCCATC AGGCGTTGCT GATCGTGCCG CAGAACCGTG AGCAGGCGCG ACAACTGCTC
GCCATGGCGC TGGATCGCGA TCCGAACTAC TTCCCGGCAC GCATCCGCCT GGCGGAACTG
GCGGAAGAAG ATCAACGCTG GCAGGAAGCG CTTGGGCATC GTCGCTGGCT GGCTGAACAT
CACCCCGGCG ATGATGAGGC GCTGGCGCTG GCGCGCACGC TTCGTCTCAG CGGACCGGAA
GGGTACGCTG AAGCTGAACA GACGCTTTTG CCGCTGGTGG AGCGCAACGA TGCGGATGCC
ATCATCGAAA TGAGCCGGCT TTACCGGGCT GCCGGGCGAA ACGATGCAGC ACGCAGCGTG
CTGGAGCAGG GGCGCCAGAA TACTGCGCGC AGCGCGCCAG CATTCGCCGA CCTTTCGCAC
GAACTCGGAC AGGTGCTGCT CGAACTGGGG GACGTCCCGC TGGCTGAGCG CCAGTTCGAA
GCGGCGGTCA ATTCAAACCC GCGTCACGTG CCTGCGCACC TGGCGCTGGC GCAACTCGCC
CGACGCGCAG GGAATGACCG CGCGGCTGCG CGGCGTTACG AAGCGGCGCT TGACGCTGGC
GCAAGCGATC CTGCCGTGCT GGAACAGATA GGGATGACGC TGCTCGAACT TCGTGAGTAC
AATGCCGCAG TGATGGCGTA TGAGCGTGCG ATTGCACAGC AACCGGCGAG CGCAACGCTC
CGCTATGGCG CGGCGCTGGC ATATCTGGGC GTGGGGCGCC TCGATGCCGC GTATGAGTCG
GCGCGGCGAG CGCTCGAGCG GCGCAATGTC TATCCGGAGG CGCTGGCATT GCTGGGGGAC
ATCGCACTGC AACGCGGCAA ACTGGCGGAA GCCGAACAGC AGTATCGCGC GGCGTTGCAG
CAGAACCCAT CGCTGGCGGC AGCGCACATC GGGCTTGGTC GAGTGGCGGC GACCGGCGGC
AACTGGTCGA TTGCAGCGGG GCATTTCCTG AATGCAGTGC AGGGTGAACC GCAATCACCC
GATGCCCTGC TCTGGCTTGG CGAGGCGCGG CTGCGTACCG CCGATATTGA TGGCGCTATT
GCGGCATACA GCGAGGCGCT GCACCTGCGC GACAATTTTC CGGAAGCATA TTTCGGGCTG
GCGCAGGCGG AGTATGGCGC AGGACGCATC GAGGATGCGC TGCGCAATGC CACCCGCGCG
CTGGAATTGC GACCACGCTA CGCCGAAGCG GCGTTGCTGC TGGGAAAGAT CTATGAACGG
CAGGGGTACA GTATGCGTGC GCTCGAAGCC TATAAACGGG CGATCGATAT CAACCCACGC
CTGGCGGAGC CGCACTACCG CCGCGCGCTT CTGCTCATCC GCGCCGATCG GTTGAACGAA
GCGCGCGAAG AACTCGAAGT CGCAACCCGC CTCGACCCCA ACTTTGCCGA GGCGCATTAC
TGGTTGGGAC GGGTCTATTT TGCGCAACGC AACATTCAGG CGGCGCTCAA CCGGTTCCGC
GAAGCGGTCA ACCGGCAGGG CGGCGCATAT CCCGAAGCGC GGTATTATCA GGGACTGGCA
GAAGAACAAC TCGGAGATTT GAACGCAGCA ATCCGGTCAT TCGAGACGGT CGCCAATCAG
AGTGACGATA CGCCCTGGGC GGGCGAAGCG CGCGCAGCGC TGGCGCGAAT GAGTGACCGC
TAG
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| Protein sequence | MQVAVISLAL LAAIGAAVLL IAPVRARLQF WLRQFWASVR RRARLARSAT VISSSGEEIE
LPDAVLADMP WTGRIRESLF DTRLRVVGAG ILLVVSILLV LPRLLPETRA DELTVLVAPF
HETGGVSGAT GRRAAVELAD LLATTSGPGV TVRSVDVAPD DLAAAQALLQ TYRADLLVWG
EITTGGMIDA PTLTPIVIYA PEGIQASYSL DGFVGRFAFP SVYPLATQPI NGRVVIPRLV
RALADYKRGA YSNAIATFDE LERDYPALRP GLLRTLRAVI WWARGDYEQS VGEFQRAIAA
MPDASPAELA RLYASLGAVQ YDMGDPASRE SFNRAIALLQ DQDLGVLRYS LALEELRAGD
PADAAVSLEQ ARRLLPPSTP LLVTLARAYR LDGQLEAAAE ILNAAARQID ADDRNVPSDL
RPLVSARLRA SVQGERALLR LAQLVDARGP LLWELDVTPP PWTQDKTTPS PETELEAILG
DLSLALREAT TLNQEWNKRA ATADTEQRRV DSSIAIHQAR RADLVLRQHR FWLAAVEVEL
ARLRDTRPPT GVAAIWAGLT RTWSPATDAL RQIDILEKTQ PGSAELTLLR GKSLVVNDRL
DEARTAFETA ARLAPDRPEP LFHQALLIVP QNREQARQLL AMALDRDPNY FPARIRLAEL
AEEDQRWQEA LGHRRWLAEH HPGDDEALAL ARTLRLSGPE GYAEAEQTLL PLVERNDADA
IIEMSRLYRA AGRNDAARSV LEQGRQNTAR SAPAFADLSH ELGQVLLELG DVPLAERQFE
AAVNSNPRHV PAHLALAQLA RRAGNDRAAA RRYEAALDAG ASDPAVLEQI GMTLLELREY
NAAVMAYERA IAQQPASATL RYGAALAYLG VGRLDAAYES ARRALERRNV YPEALALLGD
IALQRGKLAE AEQQYRAALQ QNPSLAAAHI GLGRVAATGG NWSIAAGHFL NAVQGEPQSP
DALLWLGEAR LRTADIDGAI AAYSEALHLR DNFPEAYFGL AQAEYGAGRI EDALRNATRA
LELRPRYAEA ALLLGKIYER QGYSMRALEA YKRAIDINPR LAEPHYRRAL LLIRADRLNE
AREELEVATR LDPNFAEAHY WLGRVYFAQR NIQAALNRFR EAVNRQGGAY PEARYYQGLA
EEQLGDLNAA IRSFETVANQ SDDTPWAGEA RAALARMSDR
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