Gene RoseRS_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3917 
Symbol 
ID5210900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4902561 
End bp4903205 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID640597513 
Producthypothetical protein 
Protein accessionYP_001278220 
Protein GI148658015 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0922453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCT GGATACTGCT CAAACTCATC CGTTTCTATC AACTGTTCAT CTCGCCCGCG 
CTTCCGCCGA GTTGTATTTA CGAGCCGAGT TGCTCGAAGT ATACCTATCA GGCGATTGCA
AAGCATGGTG CGTTGAAAGG AACCTATCTC GGCATTCGTC GCATCCTGCG CTGCCATCCA
TGGGCGCAGG GCGGGTACGA CCCGGTGCCG GATGAAGTGA TCTTCGCCTT TCGCCCCGTG
TCGCCTGCGG ATGTTCCCGG CATGCTGCAC CGCACCCGAC GACACCCGGC AGCGTCTGCT
GAAGAGCAGT CTGATGCTGA ACGAACGACC GAACCGGCCA GGCAGGTCGT GCGCGAATGG
GCGCAGACGG TGACGGAACG CTACCCGGAG GTGCTGCGCG TCGGGTATGT CAGCAATCCG
GCAGATGGCG ATAACAATAA CAATAACAAT GGACATAACA ATGGACATCT GGAAGTTCTG
CTGATTGTCG CGCAGTCGGA CCTGCCCTTC GATCAGCGCG CCGCTGTGTG GGAAGCGGAT
ACACCGCCCG TTCCAGGGAA GCTGAACGTC TACACCCTCA ACGAGTGGTC GCGCCTGTCG
CACCAGGTGC AGTGGGTCTT CGAGCGCGAA CAGGCGCTCC GGTGA
 
Protein sequence
MIRWILLKLI RFYQLFISPA LPPSCIYEPS CSKYTYQAIA KHGALKGTYL GIRRILRCHP 
WAQGGYDPVP DEVIFAFRPV SPADVPGMLH RTRRHPAASA EEQSDAERTT EPARQVVREW
AQTVTERYPE VLRVGYVSNP ADGDNNNNNN GHNNGHLEVL LIVAQSDLPF DQRAAVWEAD
TPPVPGKLNV YTLNEWSRLS HQVQWVFERE QALR