Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3917 |
Symbol | |
ID | 5210900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4902561 |
End bp | 4903205 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597513 |
Product | hypothetical protein |
Protein accession | YP_001278220 |
Protein GI | 148658015 |
COG category | [S] Function unknown |
COG ID | [COG0759] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0922453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGCT GGATACTGCT CAAACTCATC CGTTTCTATC AACTGTTCAT CTCGCCCGCG CTTCCGCCGA GTTGTATTTA CGAGCCGAGT TGCTCGAAGT ATACCTATCA GGCGATTGCA AAGCATGGTG CGTTGAAAGG AACCTATCTC GGCATTCGTC GCATCCTGCG CTGCCATCCA TGGGCGCAGG GCGGGTACGA CCCGGTGCCG GATGAAGTGA TCTTCGCCTT TCGCCCCGTG TCGCCTGCGG ATGTTCCCGG CATGCTGCAC CGCACCCGAC GACACCCGGC AGCGTCTGCT GAAGAGCAGT CTGATGCTGA ACGAACGACC GAACCGGCCA GGCAGGTCGT GCGCGAATGG GCGCAGACGG TGACGGAACG CTACCCGGAG GTGCTGCGCG TCGGGTATGT CAGCAATCCG GCAGATGGCG ATAACAATAA CAATAACAAT GGACATAACA ATGGACATCT GGAAGTTCTG CTGATTGTCG CGCAGTCGGA CCTGCCCTTC GATCAGCGCG CCGCTGTGTG GGAAGCGGAT ACACCGCCCG TTCCAGGGAA GCTGAACGTC TACACCCTCA ACGAGTGGTC GCGCCTGTCG CACCAGGTGC AGTGGGTCTT CGAGCGCGAA CAGGCGCTCC GGTGA
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Protein sequence | MIRWILLKLI RFYQLFISPA LPPSCIYEPS CSKYTYQAIA KHGALKGTYL GIRRILRCHP WAQGGYDPVP DEVIFAFRPV SPADVPGMLH RTRRHPAASA EEQSDAERTT EPARQVVREW AQTVTERYPE VLRVGYVSNP ADGDNNNNNN GHNNGHLEVL LIVAQSDLPF DQRAAVWEAD TPPVPGKLNV YTLNEWSRLS HQVQWVFERE QALR
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