Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3906 |
Symbol | |
ID | 5210889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4886941 |
End bp | 4887174 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640597502 |
Product | SpoVT/AbrB domain-containing protein |
Protein accession | YP_001278209 |
Protein GI | 148658004 |
COG category | [S] Function unknown |
COG ID | [COG4456] Virulence-associated protein and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.5498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACCG CCAGGATTTT CCGGAATGGT CAGAGCCAGG CCATCCGTCT GCCGAAAGAG TATCGGTTCC GCGGCGACAG AGTCTATCTC AAGCGCATGG GCAATGCAGT CGTGCTTCTT CCCGAGTACG ACTCATGGCA AACGCTCATC GAGAGTCTGT CCATGTTCTC CGACGACTTT ATGGCTGAAC GCGATCAGCC TCCCATCCAG GTACGTGAAC ATCTGTTTGA ATGA
|
Protein sequence | MDTARIFRNG QSQAIRLPKE YRFRGDRVYL KRMGNAVVLL PEYDSWQTLI ESLSMFSDDF MAERDQPPIQ VREHLFE
|
| |