Gene RoseRS_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3906 
Symbol 
ID5210889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4886941 
End bp4887174 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content54% 
IMG OID640597502 
ProductSpoVT/AbrB domain-containing protein 
Protein accessionYP_001278209 
Protein GI148658004 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.5498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG CCAGGATTTT CCGGAATGGT CAGAGCCAGG CCATCCGTCT GCCGAAAGAG 
TATCGGTTCC GCGGCGACAG AGTCTATCTC AAGCGCATGG GCAATGCAGT CGTGCTTCTT
CCCGAGTACG ACTCATGGCA AACGCTCATC GAGAGTCTGT CCATGTTCTC CGACGACTTT
ATGGCTGAAC GCGATCAGCC TCCCATCCAG GTACGTGAAC ATCTGTTTGA ATGA
 
Protein sequence
MDTARIFRNG QSQAIRLPKE YRFRGDRVYL KRMGNAVVLL PEYDSWQTLI ESLSMFSDDF 
MAERDQPPIQ VREHLFE