Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3900 |
Symbol | |
ID | 5210883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4882276 |
End bp | 4883271 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597496 |
Product | hypothetical protein |
Protein accession | YP_001278203 |
Protein GI | 148657998 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACACT CCCTCCGCTG GCTGCTTCGT CTGATCGGTC CTGCGCTCCT GATCTTCTTC CTCTGGCGCA GCGACCCGGC TGCGCTGGTT GCGGCGCTGG TCGGTATCGA TCCCGGTCCG GCGATCCTCT CGCTGGCGCT GATGCCCGTG TTCATCTGGG TCAAAGCATG GCGCTGGAGT ATCATCGTGC GTGAGCAGGG GCACACGCCG CCGTCGCTGA ACGATCTGGC GGCGCTGTAC GCAATCGGGT TATACGCTGG CGGCATCACG CCCGGTCAGT CGGGCGATTT CATCAAAGCC TGGTATCTGC GCGAACGCGG CGTGCCGCTG GCGCCCGGTC TGCTGAGCAT CCTGCTCGAC CGCCTGTTTG ATTTTGTGAT CTGGGCAGTG ATGGCAGTGC TGAGCCTGGC GGCGTTCATC GATGTTTTTC CTGCTGAAAC GCGCGGCGTC GTGCAACTGG CGACCGTCGG CTTTGCGGCT GCGGTGTTGA TCGCCACGCC AGGATTGATG GCGCGGGCGC CGCGCGAGTG GGCGCTGGGT CTGGCGATCC CGCTGGCGCC CGCGCGGTTG CGTGCGGCGC TCGAACGCCT GCGCGACCAG TTCGCGCCGC TCAGTCTGCG CTTCACGCCG CTGTTGCTGC TCCTGATCAG CACGATTGGT TCGGCAACTT CGACATTCGT GCGGATCTAC CTGATGTATC TGGCGCTGCG GCTGGGTGAT ATTCCGCTGC TCGAAATCCT GGCAGCCACC GGGTTGATCG CCATTCTCCA GGCGCTGCCG ATCAGTTTTG CAGGCGTCGG GGTGCGTGAT GCCGTGTTGA TCGCCATGCT GCAGCGCCAT GGACACGCTG CGGAGATCGC GCTGAGCCTG TCAGCGTTGT TCCTGCTCAT CAATATCCAG CACATTCTGA TCGGATTCCT GGTCTCGCTG CGCTATCCGC TCGGTGAAGC GCCATCGGAC GTGACGAAAA CCGGTGGAGG CGATGTTGAA GGTTGA
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Protein sequence | MKHSLRWLLR LIGPALLIFF LWRSDPAALV AALVGIDPGP AILSLALMPV FIWVKAWRWS IIVREQGHTP PSLNDLAALY AIGLYAGGIT PGQSGDFIKA WYLRERGVPL APGLLSILLD RLFDFVIWAV MAVLSLAAFI DVFPAETRGV VQLATVGFAA AVLIATPGLM ARAPREWALG LAIPLAPARL RAALERLRDQ FAPLSLRFTP LLLLLISTIG SATSTFVRIY LMYLALRLGD IPLLEILAAT GLIAILQALP ISFAGVGVRD AVLIAMLQRH GHAAEIALSL SALFLLINIQ HILIGFLVSL RYPLGEAPSD VTKTGGGDVE G
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