Gene RoseRS_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3900 
Symbol 
ID5210883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4882276 
End bp4883271 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID640597496 
Producthypothetical protein 
Protein accessionYP_001278203 
Protein GI148657998 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACACT CCCTCCGCTG GCTGCTTCGT CTGATCGGTC CTGCGCTCCT GATCTTCTTC 
CTCTGGCGCA GCGACCCGGC TGCGCTGGTT GCGGCGCTGG TCGGTATCGA TCCCGGTCCG
GCGATCCTCT CGCTGGCGCT GATGCCCGTG TTCATCTGGG TCAAAGCATG GCGCTGGAGT
ATCATCGTGC GTGAGCAGGG GCACACGCCG CCGTCGCTGA ACGATCTGGC GGCGCTGTAC
GCAATCGGGT TATACGCTGG CGGCATCACG CCCGGTCAGT CGGGCGATTT CATCAAAGCC
TGGTATCTGC GCGAACGCGG CGTGCCGCTG GCGCCCGGTC TGCTGAGCAT CCTGCTCGAC
CGCCTGTTTG ATTTTGTGAT CTGGGCAGTG ATGGCAGTGC TGAGCCTGGC GGCGTTCATC
GATGTTTTTC CTGCTGAAAC GCGCGGCGTC GTGCAACTGG CGACCGTCGG CTTTGCGGCT
GCGGTGTTGA TCGCCACGCC AGGATTGATG GCGCGGGCGC CGCGCGAGTG GGCGCTGGGT
CTGGCGATCC CGCTGGCGCC CGCGCGGTTG CGTGCGGCGC TCGAACGCCT GCGCGACCAG
TTCGCGCCGC TCAGTCTGCG CTTCACGCCG CTGTTGCTGC TCCTGATCAG CACGATTGGT
TCGGCAACTT CGACATTCGT GCGGATCTAC CTGATGTATC TGGCGCTGCG GCTGGGTGAT
ATTCCGCTGC TCGAAATCCT GGCAGCCACC GGGTTGATCG CCATTCTCCA GGCGCTGCCG
ATCAGTTTTG CAGGCGTCGG GGTGCGTGAT GCCGTGTTGA TCGCCATGCT GCAGCGCCAT
GGACACGCTG CGGAGATCGC GCTGAGCCTG TCAGCGTTGT TCCTGCTCAT CAATATCCAG
CACATTCTGA TCGGATTCCT GGTCTCGCTG CGCTATCCGC TCGGTGAAGC GCCATCGGAC
GTGACGAAAA CCGGTGGAGG CGATGTTGAA GGTTGA
 
Protein sequence
MKHSLRWLLR LIGPALLIFF LWRSDPAALV AALVGIDPGP AILSLALMPV FIWVKAWRWS 
IIVREQGHTP PSLNDLAALY AIGLYAGGIT PGQSGDFIKA WYLRERGVPL APGLLSILLD
RLFDFVIWAV MAVLSLAAFI DVFPAETRGV VQLATVGFAA AVLIATPGLM ARAPREWALG
LAIPLAPARL RAALERLRDQ FAPLSLRFTP LLLLLISTIG SATSTFVRIY LMYLALRLGD
IPLLEILAAT GLIAILQALP ISFAGVGVRD AVLIAMLQRH GHAAEIALSL SALFLLINIQ
HILIGFLVSL RYPLGEAPSD VTKTGGGDVE G