Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3864 |
Symbol | |
ID | 5210846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4834115 |
End bp | 4835164 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597459 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001278167 |
Protein GI | 148657962 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.791347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.192694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTG ACGATCTTGA CACTCCTGTA GCCATCATTG ATCTTGATCG CCTGGAGAGG AACATTGCAC GGTTTCAGAC ATACCTCAGC CAGCACGGCA TCGCCAATCG CCCGCACATC AAAACCCATA AAATCCCGCA GATCGCCCGG ATGCAGATGG CTGCCGGCGC AGTTGGCATC ACGTGCCAGA AACTCGGCGA GGCGGAAGTG ATGGCGGATG CCGGTATCGA CGACATCTTC ATCCCGTACA ACATCATCGG CGCCGCCAAA CTGGAGCGCC TGACCGCCCT TGCCCGTCGG GTGCGGTTGA GCGTTGCAGC CGACTCGGTT GCTGTCATTA CCGGGTTGGG GAACGCCATG GCTGGAACCG GTCTTGAACT GACGGTGCTG GTTGAATGTG ATACCGGCAT GGGGCGTTGC GGAGTGCAGA CTCCCGCCGA GGCTGTTGAA CTGGCGCTGC TCATCACACG GACGCCGGGT CTGCGGTTTG GCGGCTTGAT GACCTACCCC TCAAGCCCGG AGATCGGTCC GTTTATGCAC GAAGCCGTGC GTCTCCTGCG TGATCGGGGG ATCGCCGTCG AACGGGTCAG CGGCGGCGGA ACTGCGGGGA TGTGGCGCGC CCACGAGCAC CCGCAGATCA CCGAATACCG CGCCGGTATG TACATCTATG GCGACCGATA TACCCTGCGC GCGGGCGCGA TGCAATTGGA GGAGTGCGCA TTGACCATCA TCACCACCGT CGTCAGTCGC CCGACGCCGG ATCGCGGGGT TATCGACGGC GGGAGTAAAA CATTTTCCTC CGATCTGCTG GGGCTGGAGG GGTACGGTTT GATCCTGGAG TACCCGGACG CGCGCATTGT CAGTCTCTCG GAAGAACACG GCGTCGTCGA TTTCAGCCGG TGCGCGCAAC GCCCGGCGGT GGGCGAGCGG GTGAGCGTGA TCCCGAATCA CTGTTGCGTG GTGAGTAATC TGTTCGATGA GATGGTTGGT GTCCGACGCG GCGAGGTCGA AGTCATCTGG CGCGTCGCAG CGCGGGGAAT GGTGCGGTAG
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Protein sequence | MRIDDLDTPV AIIDLDRLER NIARFQTYLS QHGIANRPHI KTHKIPQIAR MQMAAGAVGI TCQKLGEAEV MADAGIDDIF IPYNIIGAAK LERLTALARR VRLSVAADSV AVITGLGNAM AGTGLELTVL VECDTGMGRC GVQTPAEAVE LALLITRTPG LRFGGLMTYP SSPEIGPFMH EAVRLLRDRG IAVERVSGGG TAGMWRAHEH PQITEYRAGM YIYGDRYTLR AGAMQLEECA LTIITTVVSR PTPDRGVIDG GSKTFSSDLL GLEGYGLILE YPDARIVSLS EEHGVVDFSR CAQRPAVGER VSVIPNHCCV VSNLFDEMVG VRRGEVEVIW RVAARGMVR
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