| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3854 |
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| Symbol | |
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| ID | 5210836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4815451 |
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| End bp | 4817037 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640597449 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001278157 |
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| Protein GI | 148657952 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000586232 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000014067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGACGGTT TGATGATCGG CAATCTGGCG CTTATCGCGT ATCTTGCGCC GCTATCACTG
TTCGTGGTGG CGCTCATGGC TTCGATCAAC CTGGTACGGT CGGTTGATCT GACCTTCCAA
CTCGGGCGTG CTGTCAGCGC AGGTTCGTTC TTGCTGTTGA TTGCAATCGG GATCGTTGTT
TTCACGTCCG GTCCAATTGT CAGCCCGCTG ATCGGCGTCG GCGAAGCGGG CATTGCGCTG
CGCCTGGATG CGCTGAGTGT CATGATGTCG TGGCTGGTGA CATTGCTGGG AACATTGCTG
ATCCAGTTCA GCCGCAACTA TCTTGATGGC GATCCGCGCC AGAAACTCTT TTTCATCCGC
CTCTACCTGA CCGTCGGCGC CGTCCTGCTG ATGGTGTTGT CCGGCAATCT CTGGCAATTA
GTGCTGGCGT GGATCGGCAT GAGCCTCGCG CTGCACGAAC TCCTGGTGTT CTATCCTGAG
CGCCCGCGTG CGATCCGGGC CGCCCGCAAG AAGTTTATCG CCGCCCGGAT TGGCGATGCA
TGTCTGATCG TCGCTGCGGT GTTGCTGGTG CAGGCATTTG GCACTGCCGA TCTGGGCATG
ATCCGTGCAG CAGCGGCTGC AGCGCTTGCG GATGGAAACG TTCCCGCCAG CGTTGCTGCT
GCCGCAATAC TGATCGTGGT GACCGCTTCA CTGAAATCGG CGATGTTCCC ATTTCACGGC
TGGTTGCTCG AAGTGATGGA AACGCCAACC CCGGTGTCGG CGCTGCTACA CGCCGGTCTG
CTCAACGCAG GCATCTTTCT GGTGGTGCGG TTCGGCGAAC TGGTCTTTCT GTCGACCCCG
GCGCTGATCA TGCTGATTGT GATCGGCGGT TTCACTGCCA TCTTCGCCTC GTCATCAATG
ATCACCCAGA GCAGCGTCAA AGTCTCGCTT GCCTATTCGA GCGCTGCGCA CATGGGTTTT
ATGTTGATGT TGTGCGGGTT CGGCGCGCAC ACGGTCGCCA TGATGCATCT CATCGCCCAT
TCCTGCTACA AGGCGCACGC CTTCCTGTCA TCCGGCAGCA TCATCGAGTA TGTGCGGAAT
ACCGGCGCCC AGAAACTGGA CACACCGCCG CATCCGCTCA GTTTCCTGGT GAATATGGCG
GCAGCGGTCG CGATCTTTCT GGCAGTTGCG ACTGCGCTCG GCATCGACAT CACCAAGCGT
CCGGGTGAGA CTGCGATGAT CACGATATTC ATGATCGCTG TCGCCTATTT GCTGGTGAAG
GGCAACACTG CCAGGGCGCC TCTTCCTGTG ATCGGTCGCA CGATGCTGAT GGCGGCGCTG
GTGACCCTCG CCTTCTTCGC CCTTGAAGTG ACCGCAGAAG CGTTGCTCGG CGGAGCAGTG
GCGGTCTACC CGCCGCTCAA TATGGCAACG ATGATCGCAA TCGTGGTGGC AGTCGTCATC
TTCGGCATCG TGATGGCGTT CAGCGCCTGG CTGCCCGCGC TGGTCAACCG CCCCGTCTGG
CAGGCGCTCT ATGTTCACCT TAAGAACGGC TTCTACGCCA ACGCTCTGTT CGACCGGTTC
ATGGACGCAG TTCGACTGGC TCGCTGA
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| Protein sequence | MDGLMIGNLA LIAYLAPLSL FVVALMASIN LVRSVDLTFQ LGRAVSAGSF LLLIAIGIVV
FTSGPIVSPL IGVGEAGIAL RLDALSVMMS WLVTLLGTLL IQFSRNYLDG DPRQKLFFIR
LYLTVGAVLL MVLSGNLWQL VLAWIGMSLA LHELLVFYPE RPRAIRAARK KFIAARIGDA
CLIVAAVLLV QAFGTADLGM IRAAAAAALA DGNVPASVAA AAILIVVTAS LKSAMFPFHG
WLLEVMETPT PVSALLHAGL LNAGIFLVVR FGELVFLSTP ALIMLIVIGG FTAIFASSSM
ITQSSVKVSL AYSSAAHMGF MLMLCGFGAH TVAMMHLIAH SCYKAHAFLS SGSIIEYVRN
TGAQKLDTPP HPLSFLVNMA AAVAIFLAVA TALGIDITKR PGETAMITIF MIAVAYLLVK
GNTARAPLPV IGRTMLMAAL VTLAFFALEV TAEALLGGAV AVYPPLNMAT MIAIVVAVVI
FGIVMAFSAW LPALVNRPVW QALYVHLKNG FYANALFDRF MDAVRLAR
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