Gene RoseRS_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3847 
Symbol 
ID5210829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4806197 
End bp4806580 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content53% 
IMG OID640597443 
ProductHEPN domain-containing protein 
Protein accessionYP_001278151 
Protein GI148657946 
COG category[S] Function unknown 
COG ID[COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000584518 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000679911 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACGAAA GTAACCCGCT GGATTGGGCG GCGAAGGCTG AAAGTGACCT CGATATGGCG 
CGTCGTGCAT TGCGCGGCAA GATCAAACGC ACCGATGCGG CAGTGTTCCA CGCGCAACAA
TGCGCTGAAA AGTATTTCAA AGCTCTGTTA GTCGCCGGAG GTGTTGCATT TCCGCGAACA
CACGACTTGA TCATCTTGAA TCATCTTTGC TTGAGTAATG GCGTTTCGAC CAATTTTGAT
GCACAACAGC TCGAATTTCT CTCGGGATTT GCTGTGCTTG CGCGTTATCC AGGCAGGGAA
CCCTCGTTCG AAGAGGCTCG CGAAGCCATT GCCATCGCCA GAAGCGTTCG TGCATTCGCG
CGCCGCCGGT TGGGGGTGAA ATAA
 
Protein sequence
MNESNPLDWA AKAESDLDMA RRALRGKIKR TDAAVFHAQQ CAEKYFKALL VAGGVAFPRT 
HDLIILNHLC LSNGVSTNFD AQQLEFLSGF AVLARYPGRE PSFEEAREAI AIARSVRAFA
RRRLGVK