Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3832 |
Symbol | |
ID | 5210814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4792159 |
End bp | 4793010 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640597428 |
Product | ABC transporter related |
Protein accession | YP_001278136 |
Protein GI | 148657931 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.363702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000120659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCACCG TCGAACATCT GAGTTTCACC TACACCGGCG CTGACACGCC CGCCATTCGA GATCTGAGTT TTGACGTTCA GGCAGGCGAG ATCTTCGGTT TTCTCGGACC CAGTGGCGCG GGAAAATCCA CAACGCAGAA GATTCTCATC CGCCTGTTGC GCAACTTTTC GGGCAGGGTT GACGTTCTCG GACGAGACCT GCGCACCTGG AACAATGATT TCTACGAGTA TGTCGGCGTC AGCTTCGAAC TGCCCAACCA CTATGGCAAA TTGACCGCAC TCGAAAATCT GCGGTATTTT AGCCGTCTCT ATCGTAATCC GACCGTTCCG CCAGAACAAT TGCTGGAGAT GGTGGGATTG GAAGAAGATG GCAACCTGCT GGTCTCACAG TTTTCCAAGG GCATGAAAAT CCGTCTGAAC CTGGCGCGGG CGCTGCTGCA CAATCCGAAA CTCCTCTTTC TCGATGAGCC GACCGCCGGT CTCGATCCGG TCAACGCTCG CCGCATCAAA GACCTGATCA AGGCGCAGCA GGCCGCCGGG CGAACGATCT TCCTGACAAC GCACGATATG GCGATTGCCG ATGAACTGTG TGACCGGGTG GCATTCATCG TAGACGGGCG CATTAGCCTG ATCGATTCGC CGCGCGCCCT CAAACTGCGC TACGGGCGCA AAGAGGTGCG GGTGGAATAT CTGGTGAACG GTCGCACTGC AACCTGTGAT TTTCCCATCG ATGGGTTGGC GGATAACCCC GATTTCCTCG CCACCCTGCG TTGTCCGGTG CAGACGATTC ATACCCAGGA GGCGACCCTG GAGCATATCT TCATTCAGGT GACGGGACGG AGTCTCGCAT GA
|
Protein sequence | MITVEHLSFT YTGADTPAIR DLSFDVQAGE IFGFLGPSGA GKSTTQKILI RLLRNFSGRV DVLGRDLRTW NNDFYEYVGV SFELPNHYGK LTALENLRYF SRLYRNPTVP PEQLLEMVGL EEDGNLLVSQ FSKGMKIRLN LARALLHNPK LLFLDEPTAG LDPVNARRIK DLIKAQQAAG RTIFLTTHDM AIADELCDRV AFIVDGRISL IDSPRALKLR YGRKEVRVEY LVNGRTATCD FPIDGLADNP DFLATLRCPV QTIHTQEATL EHIFIQVTGR SLA
|
| |