| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3813 |
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| Symbol | tpiA |
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| ID | 5210795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4767347 |
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| End bp | 4768111 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597409 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001278117 |
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| Protein GI | 148657912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.491163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACGC CACTCCTTGC AGGCAACTGG AAGATGTACA AAACAACCGG TGAGGCACGC
GAACTGGTCG AGGGATTGTT GCACGGGCTT GGTGATGTCA GCGACCGAAA GGTCCTGGTT
TGCCCGCCGT TCACTGCGCT GCACACGGTG CGTGATCTGG TGCAGGGCAC GCCGATTGCT
CTGGGGGCGC AGGATGTCTA CATCGAGCCG CAGGGCGCCT TTACCGGCGC GATTTCACCG
GTGATGCTGC GCGATCTTGG ATGCACGTAT GTGATTGTCG GTCACAGTGA ACGACGCGCC
ATTTTTGGCG AAGGTGACGA ACTGATCGGA AAGAAGGTCC GCGCCGCGCT GGCGCATGAT
CTCACGCCCA TCCTGTGTGT CGGCGAGACC AAACCGCAGC GTGACGCCGG TGAAGCCGAG
ACAATCGTTG TGGCGCAGGT GCGCGCGGCG CTTGCCGGTA TGACACCGGA TCAGATCGCT
CGAATTGTCA TTGCCTATGA GCCGGTCTGG GCGATCGGCA CCGGCGATAC TGCCACTCCT
GCCGATGCAC AGGCGATGCA TGTGACGATC CGGCAGACGC TTGGCGAACT GGCAGGGTCC
GATGTGGCGG ATGCGATCAA CATCCTGTAC GGCGGCAGTG TCAAGCCCGA CAATATCGAT
GACCTGATGG CGCAACCCGA TATCGATGGA GCACTGGTTG GCGGCGCTTC CCTCAAAGCC
GACAGTTTCC TGCGCATCGT CCATTTTCTC CCGATCCAGG GATGA
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| Protein sequence | MRTPLLAGNW KMYKTTGEAR ELVEGLLHGL GDVSDRKVLV CPPFTALHTV RDLVQGTPIA
LGAQDVYIEP QGAFTGAISP VMLRDLGCTY VIVGHSERRA IFGEGDELIG KKVRAALAHD
LTPILCVGET KPQRDAGEAE TIVVAQVRAA LAGMTPDQIA RIVIAYEPVW AIGTGDTATP
ADAQAMHVTI RQTLGELAGS DVADAINILY GGSVKPDNID DLMAQPDIDG ALVGGASLKA
DSFLRIVHFL PIQG
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