Gene RoseRS_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3809 
Symbol 
ID5210791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4764346 
End bp4764957 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID640597405 
Producthypothetical protein 
Protein accessionYP_001278113 
Protein GI148657908 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.790094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGA CGATCGCGTC TATCGCCCTT GTGCTTCTCG CCTATCTGTC CGGTTCGATC 
CCCTTCAGTC TGCTGGTTGC GCGCGCCTGG GGCGTCGATC TGCGCGTGTC CGGCAGCGGC
AATGTCGGCG CTGCGAATGT CTGGCGCACC TGCGGATTCA GCGCATTTGC ACTTGCCATG
GGCGGCGACA TGCTGAAAGG CGCTCTGCCA ACCATTGCTG CACAGGCGCT CGGTCTTTCA
CCGCTTGCGG TGGTGATCGT CGGCACGGCG GCAATGCTGG GTCACACGCG CTCGATCTTT
CTGGGTTTTC GCGGAGGTAA AGCGGTGGCA ACTGGCGGTG GCGTGGTGCT GACACTGGCG
CCACTCGTGG CGCTGCCCGG TCTGGCAGCG TGGGCGGTAA CGTTTGGCAT CACGCGCATT
TCGGCGGTCG CGTCGCTGAC GGCAGCTGCA GTGTGCGGCA TTGCTGCTGC CGTGCTGCTG
GCGCTGGGCA TGCTACCGCC TGCATATGCC ATCTTTGTGT GGGGAGCGGT TGCTGCAATC
GTGTTTCTGC ATCGCTCGAA TATTCATCGC CTGCGCACCG GAACCGAGAA TCGCTTCGAG
AAACTGTTCT AG
 
Protein sequence
MMPTIASIAL VLLAYLSGSI PFSLLVARAW GVDLRVSGSG NVGAANVWRT CGFSAFALAM 
GGDMLKGALP TIAAQALGLS PLAVVIVGTA AMLGHTRSIF LGFRGGKAVA TGGGVVLTLA
PLVALPGLAA WAVTFGITRI SAVASLTAAA VCGIAAAVLL ALGMLPPAYA IFVWGAVAAI
VFLHRSNIHR LRTGTENRFE KLF