| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3800 |
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| Symbol | |
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| ID | 5210782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4753901 |
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| End bp | 4755193 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597396 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001278104 |
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| Protein GI | 148657899 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG AAACTATAAC CAGGCTTGAA GCTGAAAACG CCGCGTTGCG TCAGCGTATC
AACGAATTGG AAATGCGCCT CGAAGCGTAT CACACGGGCA ACGCCATGCT CCGTACAACC
GGTCACACCG GCGCCTTCAA TGAGTTTCAA GGATTTCGTA CTACGGTCGA GCGTGCATCA
CAGGGCATTG TGATCGTTCA TCTCGAAGGC GTCATCACCT ATGTCAATTC TGCATTTTGT
GCATTGACTG GCTATCATGC ACTTGTCGGC AGGCATATAA GCACGCTCTA TTTCGAGTAC
GATCTCCCAT TGCTGGACAG GGGCTTGCAG AAAGTCAGGT ACGATGGCAT CTGGCAGGAC
AACATCTCGT TGCGCCGCAG CGATGGCGCT GCTATCCCGG TGCATATCGA CGCTTTTCTC
ATCTGTGATG ATGCCGGACA ACCGGCGGCG ATAACCGTCA TTGTCGAGGA TCTGACCGAA
GAACTCCGGC GTGAGGAGCG GCTGCGCCTG TTCGAGGCGC TGGTCGAAAA CGCCCCCGAT
GCCATCGGCG TCGCTAATGT CAGGGGCAAT GTTATCTACG CCAACACTGC GTATCAGACG
TTGACCGGCT GTGGCGACCA GCTCATCGGC ATGAATGCCT TCGATGGCAT CGTAGAACAT
GATCGCCAGG CAGTGCGCAC AGCGCTGGCG CGTCTGGAGG ACAATAACGC AGTTGTGCTC
GACATTCGCA TCCAGCGCAG GGACGGCGGC ATTGCGCCGG TGTCGGCAGC GATGTATGCG
CAGCGATCTC CGCGCGACGA GGTGTGGCTC ATCGGCTTCC TGCGCGACAT CAGCGACCAG
AAACGCGCCG AGGCGGAACG CTTCGCGCTC CAGCAGCAGG TGATCGAGGC GCAGCGCGCC
GCCATCCGCG AACTCTCCAC CCCGCTCATT CCGATCAGTG AGACGGCGGT GATTATGCCG
CTGGTCGGCG CCATCGACAG CGCGCGGGCG CAGCAGATCA TCGACACCCT GCTCGAAGGG
GTCGCCGCCC ATCGCGCGGA CGTGGCGATT GTTGACATCA CCGGGGTGCA GGTGGTCGAT
ACGCAGGTCG CCAGTGCGCT GGTGCGCGCC GCACAGGCGG TGCGGCTGCT GGGGGCGCAG
GTGATCCTGA CCGGCATCAA GCCGCAGGTG GCGCAGACGC TGGTGCAGTT GGGGGTCAGT
CTGGAAGGCA TCCGCACCAC CGGGTCGCTC CAGACCGGCA TACGTCTGGC GCTGGATCAC
GATGCCATCC GGCGAAAGGG CGCCGGACGC TAA
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| Protein sequence | MSSETITRLE AENAALRQRI NELEMRLEAY HTGNAMLRTT GHTGAFNEFQ GFRTTVERAS
QGIVIVHLEG VITYVNSAFC ALTGYHALVG RHISTLYFEY DLPLLDRGLQ KVRYDGIWQD
NISLRRSDGA AIPVHIDAFL ICDDAGQPAA ITVIVEDLTE ELRREERLRL FEALVENAPD
AIGVANVRGN VIYANTAYQT LTGCGDQLIG MNAFDGIVEH DRQAVRTALA RLEDNNAVVL
DIRIQRRDGG IAPVSAAMYA QRSPRDEVWL IGFLRDISDQ KRAEAERFAL QQQVIEAQRA
AIRELSTPLI PISETAVIMP LVGAIDSARA QQIIDTLLEG VAAHRADVAI VDITGVQVVD
TQVASALVRA AQAVRLLGAQ VILTGIKPQV AQTLVQLGVS LEGIRTTGSL QTGIRLALDH
DAIRRKGAGR
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