| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3797 |
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| Symbol | |
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| ID | 5210779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4750319 |
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| End bp | 4751704 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640597393 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001278101 |
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| Protein GI | 148657896 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGA TCGAAGACGC CATGACCGCG CAACCGGCAG GCATCTGGGT TGCCGGACGA
CGTATGCTCA CTGTTGGTCT GACGCTGATC ATCATCGCAA CCGCCTTCGA GATGCTGGCG
GTCGCTGCAA CGATGCCGGC CACGGCGCAA GACCTGGGTG GACTGGCGTG GTATGGTTGG
GCATTCAGTG CGTTCATGCT GGCAAACATG GTTGCAGCGA CCGTCGCGGG ACCAGAGGCG
GATCGCCGGG GGATTGCGAC GCCATTTATC GCCGGCACAT GCCTGTTTGT TGGCGGTTTG
CTGATCGCCG GTCTTGCCCC CACCATGCCG CTGCTGATTG TCGGGCGCGC CGTGCAGGGG
CTGGGTAGCG GCATCATTGG CGCGGTGGTC TACATCATCG TGGGACGTGG CTATGAGACG
GATGCGCGTC CGCGCATGCT GGCGATCATT TCGAGCGCCT GGGTTGTGCC GGGCATGGTT
AGTCCAGGAG TGGCGGGAAT TATTACCGAA ACCATCGGCT GGCGCTGGGT CTTTCTCGGC
TTGATCCCGC TACCGATCCT GGCGGCATGC ATGGCGCTGC CGTCGTTGCG TCGTCTGGCG
CCAGCGCAGC ATAGTACGTC TGGCAATCAT CAACGTAACC GTGAGATCAG GCTGGCGCTT
GTGCTCGCCA CAGGCGCAGG AATGGTCATC GGCGGACTGG GGTGGATGAG CGCTGCGCCG
CCGACGGGCG TGGCGCTCCT CTCCCTCGGC GCAGTTGCGA CAATCATTGC GCTACGTCAG
GTGCTGCCCG CAGGAACGCT CCGTGCCGCA CCCGGACTTC CAGCCGCCAT CGCGGCAATG
GGGCTGCTCA ACCTGGCATT CTTCGGCGTC GATGCATTCG TCCCGCTGGC GCTTACGACC
GTGCGTGGGT TGAGCATCGT TACCGCCGGG CTGGCGCTGA CCGCTGCCAC CCTGACGTGG
ACTGCTGGCG CATGGATGCA GGCGCGTCTC GCCAGACGCA TGCCACCTGG CTCGATTGCT
GTCCTCGGCT TGCTGGTGAT GCTGATCGGT ATAAGCGCCA CGACGGCCAC AGTCGCTCCA
GTAATGCCAG CACTCCTCAG TATTGGTACG TGGGGTATCG CCGGATGCGG CATCGGTCTG
GCGTACTCGG CTCTTTCCCT TGCGGTGCTT CAGAATGCAA CGCAGGGTCA CGAGGGCCGC
GCATCATCAG CGTTGCAGAT TGCCAGTCAA CTTGGAACTG CGCTCGGCGC AGGCATTGGC
GGCGTGATCA TCGGCTCAGG AGGAAGCGGC ATAACCGTTG CAGCCGAACG CGTCATGCTG
CACTTCGTAC TGATGATCGT CGTCACCGGC ATCGCCGTTT TGACCGCGTG GCGCGTGGAA
CGGTGA
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| Protein sequence | MSMIEDAMTA QPAGIWVAGR RMLTVGLTLI IIATAFEMLA VAATMPATAQ DLGGLAWYGW
AFSAFMLANM VAATVAGPEA DRRGIATPFI AGTCLFVGGL LIAGLAPTMP LLIVGRAVQG
LGSGIIGAVV YIIVGRGYET DARPRMLAII SSAWVVPGMV SPGVAGIITE TIGWRWVFLG
LIPLPILAAC MALPSLRRLA PAQHSTSGNH QRNREIRLAL VLATGAGMVI GGLGWMSAAP
PTGVALLSLG AVATIIALRQ VLPAGTLRAA PGLPAAIAAM GLLNLAFFGV DAFVPLALTT
VRGLSIVTAG LALTAATLTW TAGAWMQARL ARRMPPGSIA VLGLLVMLIG ISATTATVAP
VMPALLSIGT WGIAGCGIGL AYSALSLAVL QNATQGHEGR ASSALQIASQ LGTALGAGIG
GVIIGSGGSG ITVAAERVML HFVLMIVVTG IAVLTAWRVE R
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