Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3769 |
Symbol | |
ID | 5210751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4712536 |
End bp | 4714692 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640597365 |
Product | hypothetical protein |
Protein accession | YP_001278073 |
Protein GI | 148657868 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.027232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000170961 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTACTTCT CCTGTTACCA TCACCGCATC TGTACACGCG TGAGCCTGGC ATGGGCGCTT CTGTTCCTGG GCGCCCTTGT GATGAGCGCT GATCCCTCCA GCGCTGCGGC TGCGGCACGA TTGCCGTCTG AACCAGGGAC GTATCGCTTC ACCGATCTCG GTTACGGCGA CCGGACGGCG CGAACGATGT ATGGCGGTCT GGATTATTTC TTTCCGGTTC CCGCCGGTGA AGAACCGCTC GAAGGCGCGC GCCTGGAACT GATCTACAGC CACTCGCCGC TGCTGCTGCC GGAACGCTCG ACCATGACCA TCATCGTCAA TGGTCTGTCG GTGCAGAGCG TCCGACTGAC GCCAGAAACC CGGACGAGGG CATCATTGAC CGTGCCGCTG CCGCCAGACA TGTTCGGCGG CGAGGGGTTC TTTGTGCAGG TACGTTTTCA GATGCGCCTG ACCCGCGACG AGTGTGAGGA GACCCGCAAT CCGGCGTTGT GGGCGACCAT CCACGGCGAC TCGCTCCTCG TGCTGCCGAC GCGACCGGTC AGGACATACC GCCTGGAGCA TCTTGACCGC CTGTTCCGCC CCCCGCCCGA TGATCGTCCA CCGCTGACGC TGGTTATCCC GCCATCACCA TCGCCTGAAG AACTGGAAGC CGCAGGGCTG ATTGCGTTTC AGTTGGGACG CTGGGCGGCT GCCGTTCGCG CCGACCCGCG TCTCGTCGTT GCGACGACCG TGACCGATAC AGCCAGCATC GTTGTTGGAA GTGCGCCTGC ACTGGCAGGG ATGCTGCCAT GGGGCGCCAT CGATTGGAAC GGAACTGCGG TGACTATCAA CGGTATTGCC ATCCCGACAG ATCACGGCGC CCTTGCGCTG GCGAACGACG GAACGCCGCG CCTCCTCGTC ACCGGCGCAA CCCCGGCGGC AGTCCGCCTT GCTGCACGTA CTCTCGTCGC GCCGGAACGA CGCGCCCTGC TGGATGGTGC GTATGTAGCA ATCACCGACG CGCCCGTCTC TACAGCGACG CCGGCGCCCT GGGTGAATGG CGCGGCCAGT TTCGCTCAAC TCAATGTCCC GGAGCGGGTT GTGAACGGTC CTGGTGAGCA CCGCATCGAC CTGGCGTTCA CCCGCCCCGC CGGGTGGCGT TTACGCGACG GCAGCACTCT GACGCTCGAC ATGGAAGTGA CCCCGGCAGT GCGCCGTGAA ACGTCCTGGA TTGCCGCCAG CGTCAATGGC ATCGATCTGG GAGCGCAGCC GCTGCGGTTC GACACGGATC GCCCTCAGCG GTATTCGTTC GCCCTGCCCG CCGATCTGCT CACCACAACC CTCGACGGCA GACCGATACG CACCCTCGAC CTGACTGTGC GCCTGTTCCT CGATCCGCCA GAGGAGGGGT GCGTTGTCGT CGATGGCAAT AGTCTGCGCG CGACGTTGCT CCCCACCTCG GCGTGGCGTC TGCCGCACGA TGTCATTTCG ACGCTCGATC TCGGTCGGTT TCCCACACCC ATGCTGAGCA TCGATTCCCG TCTGCCGCTG ACCGTGGTGT TGCCGCAACA ACCCAACACA GCGGAGTATG CCACAGCGTT GCGCCTGATA GCGGCATCAG GTCGATGGGC GGACACCGAC AGCGTTCCGG CGCCACGACT GATCACCGCT GATCGTCTGG AAGAGCGCAA TGGGCGGCAT CTCGTCCTGA TCGGCAGCGC GGAACGCAAT CCTATCAGCG CCGAAGCGAT AGCCCGCCAA CCGGATCGTC TGGCGCCACC CCAGGCAGTC GTCTACCGTC CCGACGACAA CCGGCAATGT CGCCTGCTAC TCACCTCTTC GCCCTGGCAA CGCGACGCTG CGTTGCTCCT GATCGACGGT GCAACGCCGG ACGATCTGAT CATCGGGATT GCTGCATTTG AACGCCGTGA AACCATCGAG CGTCTGCGCG GTCCGCTTGC GCTGATCCGC ACCGATGCGC CGCCCCAGAA CAGCGCTGGC GCATCAGATA TCGCTCCCCC GCCGATCAGT CTCACGCCGC AGATCGAAAC ACCGCTGCTG GAGCGCTTGC CCGGCTGGCA GATCGCAGGC GCCGTGTTGC TCGGCGCGTT TTTGAGCGCA CTTGGTATTC TGCTGACTAT TCAGGTGCGG CGACGAATCC GACGGAAAAC GCCATGA
|
Protein sequence | MYFSCYHHRI CTRVSLAWAL LFLGALVMSA DPSSAAAAAR LPSEPGTYRF TDLGYGDRTA RTMYGGLDYF FPVPAGEEPL EGARLELIYS HSPLLLPERS TMTIIVNGLS VQSVRLTPET RTRASLTVPL PPDMFGGEGF FVQVRFQMRL TRDECEETRN PALWATIHGD SLLVLPTRPV RTYRLEHLDR LFRPPPDDRP PLTLVIPPSP SPEELEAAGL IAFQLGRWAA AVRADPRLVV ATTVTDTASI VVGSAPALAG MLPWGAIDWN GTAVTINGIA IPTDHGALAL ANDGTPRLLV TGATPAAVRL AARTLVAPER RALLDGAYVA ITDAPVSTAT PAPWVNGAAS FAQLNVPERV VNGPGEHRID LAFTRPAGWR LRDGSTLTLD MEVTPAVRRE TSWIAASVNG IDLGAQPLRF DTDRPQRYSF ALPADLLTTT LDGRPIRTLD LTVRLFLDPP EEGCVVVDGN SLRATLLPTS AWRLPHDVIS TLDLGRFPTP MLSIDSRLPL TVVLPQQPNT AEYATALRLI AASGRWADTD SVPAPRLITA DRLEERNGRH LVLIGSAERN PISAEAIARQ PDRLAPPQAV VYRPDDNRQC RLLLTSSPWQ RDAALLLIDG ATPDDLIIGI AAFERRETIE RLRGPLALIR TDAPPQNSAG ASDIAPPPIS LTPQIETPLL ERLPGWQIAG AVLLGAFLSA LGILLTIQVR RRIRRKTP
|
| |