Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3762 |
Symbol | |
ID | 5210744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4704645 |
End bp | 4705721 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640597358 |
Product | histidine kinase |
Protein accession | YP_001278066 |
Protein GI | 148657861 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00011366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000145112 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGACGGTGA ATGATACTGC GCCATCCCTC AAAGAACTCT ACGATAAATT GAATGCCGAT CTGGAAAAAA CGCGCCGGGA ACTGATCGAG ATCGAAGCGC TTCTGCGGCA GACATCCAAC GAGGTCGAAA AACTCCAGCA GCGCGAACTC ACCGTCTCGA ATCGCCTGCG CGATCTGGAT GTCAATGTTG ATCGGTACAG CAAGGCGGAC ATTAAGAATT TTTATGCTTC GGCGCAGGAG GTGCAAATGC GTCTCCTGAC GATGCGCAGC CAGCTTGAGC AGTTGCAATA CCGTCAGCAG GCCGCCAGGC AACGGCAGAG TCAGGTGTTT GAACTGATCA CCGCGCTCGA ACCGTTGCTG GGTGTTGCTG CACCTGCCGG CGGCGCTCCC GGCATGATCG GAAGCGACCA GTTGATTGCC GATATTATTC AGGCGCAGGA AAAAGAACGC TTGCGCATTT CGCTTCAGAT GCACGACGGT CCGGCGCAAT CGATGAGCAA CCTTGTGCTG CGCGCCGAAA TCTGCCAGCG TCTGCTCGAT CGCGATGTTG AGATGGCGCG CGCCGAACTT GGCGCCCTCA AAAATGCCAT CAATGCCACC CTCCAGGACA CGCGCCGCTT CATCTTCGAT CTCCGCCCCA TGATCCTTGA TGATCTCGGT CTTGCGCCGA CGTTACGGCG CTATGTTCAG CAGGTGAGCG AAAAGAACAA ACTCGACATC AACCTGATGG TGCAGAATCT TGATATGCGC CTGCCTTCCC ACTACGAAGT CGCCATTTTT CGCTTCATTC AAGAGGCGCT CAACAATGTC ATCAAGCACG CCAATGCCAC CCAGGCGCGT GTGCTCGTCA GCGTGCGCGA TGATGTCGGT GGAACGCGCA TGATCCACGT ATCGGTCGAG GATGACGGCA GCGGATTCCA CGTCAGCGAC GTGCTGGCTG ATGACAGCGG ACGGCGCAAC ATGGGAATCG CCACGCTCCG TCAACAGGTC GAAACGCTGC TCCGCGGCGA GTTCGGCATC GAAAGCGCCA TCGGGCGTGG TACGCGCGTC GAAGCGTTGA TTCCCCTGCC GATGTAG
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Protein sequence | MTVNDTAPSL KELYDKLNAD LEKTRRELIE IEALLRQTSN EVEKLQQREL TVSNRLRDLD VNVDRYSKAD IKNFYASAQE VQMRLLTMRS QLEQLQYRQQ AARQRQSQVF ELITALEPLL GVAAPAGGAP GMIGSDQLIA DIIQAQEKER LRISLQMHDG PAQSMSNLVL RAEICQRLLD RDVEMARAEL GALKNAINAT LQDTRRFIFD LRPMILDDLG LAPTLRRYVQ QVSEKNKLDI NLMVQNLDMR LPSHYEVAIF RFIQEALNNV IKHANATQAR VLVSVRDDVG GTRMIHVSVE DDGSGFHVSD VLADDSGRRN MGIATLRQQV ETLLRGEFGI ESAIGRGTRV EALIPLPM
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